Leeuwenhoekiella palythoae: LDL79_13250
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Entry
LDL79_13250 CDS
T07563
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpal03400
]
LDL79_13250
DNA repair and recombination proteins [BR:
lpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LDL79_13250
Archaeal homologous recombinant proteins
LDL79_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
AAA_18
AAA_21
ABC_tran
DUF2551
MYRF_ICA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UBZ09757
LinkDB
All DBs
Position
complement(3097396..3100419)
Genome browser
AA seq
1007 aa
AA seq
DB search
MKILKIAFKNINSLRGEHEIDFTQEPFLQNSLFAITGPTGSGKTTILDVISLALFNQVPR
IGSINKNDVLKKGAILTRNQSDAYASITYQCNSGIFISTWSISTARTGNLREYHMEITDV
QSGTFIDVNKGKVPSKNEELIGLNYDQFIKSVVLAQGEFAKFLQVPKKERGALLEKITGT
DIYRRIGMEVFLRNKERAKKIDAKRAKIETFREQLLEEDTFTAKQKEAETLSETQQQLKQ
TIEQLTKEIELKKKLQAEERELQKTQKELGEVVALQENFEKEKGDALKHHEAIQLFAEEL
NQWQSLQEKQKEKQTEIIKATEALEAAKAQREHLTQQLSEQFKLTVTPTDFSEKMELYKA
EVRALIDERNALRTAFETSKNPLQTAAREFDLLFDLKDLKGFETALQEKSTKTKSAYAAL
ENRFDLKNASVAERLATIQSKLKNIRAAEKAHMALSTLQSQRKERNEEYVSIQKQQAQLP
EEVKQLKQQIELKEAQHTAKQKTLEVEQLQKQLEDYRKDLQNNEPCPLCGSLDHPFAAHI
PQEENGLKAAVLQLEHELKTLNKELVTRESSLQQLTQQTQQLEQRIKVLDEELSAQQTTF
DAQFKNLMQSKGSATFNELELQLEQQEQELNSAEKLQQNIKVLAQIQQQTTDLKGLLAKG
KKKAEAISAVYSGKNFEQDISHIETSWNRNEQTVNQQQQLLTTAKETEHDLAKTLEGLTT
SLVGQLNKKGYKSIEDALQKRLNAATAQTWKQELEKINDEALRLKTLRNKLIEEIQILTD
SASDAPLEKLQEQHQAQTETLQQNEHLASDLSRQLLNHKDNLEQIRKLQKQIDQELKNGE
HWLILNNLIGDANGNKFNDFAQDLTLAQLLQLANKRLKHLTDRYQIDQPADDEDDSLVAI
DEHMGGQRRSIKTLSGGETFILSLALALALSDLASRNIEINSLFIDEGFGTLDPETLDQT
LDTLEVLQAESSKMIGVISHVDSLKERIATQIQLTQNGQGYSSLKIV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattaaaaattgcttttaaaaacatcaactcgctgcgtggtgagcacgagatc
gattttactcaagaaccctttttgcaaaacagcctttttgcgatcacgggcccaaccggg
agcggaaaaaccacgattcttgatgtgatctctttggcgttatttaatcaagttcctaga
attggttcaataaataaaaatgatgttctaaaaaaaggagccattcttacacgtaatcag
tctgatgcttatgccagtatcacttaccaatgtaattctggaattttcatctctacctgg
tctatttctactgcacgtaccggtaatctacgtgaatatcatatggaaataactgatgta
caaagtgggacctttatagatgttaataaaggtaaagtaccttctaaaaatgaggagctg
atcggtttgaattatgatcagtttatcaagtcggtagtgttagctcagggcgaatttgcc
aaatttttacaagtgcccaaaaaggaacgcggtgcgcttctagaaaaaataactggaact
gatatctatcgtagaattgggatggaagtgtttcttcggaataaagagcgtgctaagaaa
attgatgctaaacgcgctaaaattgagactttcagggagcaattgctggaagaagatacg
ttcacagcaaagcaaaaagaagctgaaactttatccgaaacacaacaacaattaaagcaa
acgatcgaacaacttactaaagagatcgagctcaaaaagaaactacaagccgaagagcgc
gaactgcaaaaaacacagaaagaactaggcgaagtggttgcgcttcaggaaaacttcgaa
aaagaaaaaggagatgcactgaagcatcacgaagcgattcaactttttgcagaagaactc
aatcaatggcaaagtttgcaggaaaagcaaaaggaaaagcaaaccgaaatcattaaggct
acggaagctttagaagctgcaaaagcccaacgagagcacttaacgcagcaacttagcgaa
caatttaaactcacggtcacgccgactgatttttcggaaaaaatggaactgtataaagcg
gaagtccgtgccttgatcgatgagcgcaatgccttgcgcaccgctttcgaaaccagtaaa
aatccgttgcaaaccgcagctagggaattcgatttacttttcgacttaaaagatctcaaa
ggttttgaaactgctttacaggagaaatctacgaagaccaaatctgcgtatgcggcttta
gagaaccgctttgacctcaaaaatgcttcggtagcagaacgattggcaacaattcaatcc
aaactgaaaaacatccgcgcagctgagaaagcacatatggctttaagcactttgcaaagt
caacgtaaagaacgtaatgaagaatacgtttctattcaaaagcaacaagcgcagttgccc
gaagaggtcaaacaactgaaacagcagatcgagttaaaagaagctcagcacaccgctaag
caaaaaacgctggaagtagaacagcttcaaaaacaacttgaggattaccgcaaagacctg
caaaataatgaaccttgtccgctttgcggttcgcttgatcacccttttgcagcccatatt
ccgcaagaagaaaacggactcaaagctgcggtgcttcaattagaacacgaattaaaaaca
ctgaacaaagaactcgtgacgagagaaagttcgcttcagcaattaacgcaacaaacacaa
cagctcgaacagcgtataaaagttctcgatgaagaactgagtgctcagcaaaccactttt
gatgctcaatttaaaaacctgatgcaatctaagggcagcgccacgtttaacgaattggag
ctccaactggaacagcaagaacaggaattaaattccgctgaaaaacttcagcaaaacatt
aaggtacttgcgcaaattcaacagcaaacaaccgatctaaaagggctgttggcaaagggt
aaaaagaaagcagaagcaatttccgcagtctattccggtaaaaattttgaacaagacatc
agtcacattgaaacctcctggaatcgtaacgagcaaaccgtaaaccagcaacaacagctg
ctcacaacagctaaagaaacagaacacgatcttgcaaaaaccttagaaggtctcactacc
agcttagtagggcaattgaacaaaaaaggctataaatctattgaagatgcattacaaaag
cgtttgaatgccgcaaccgctcaaacttggaaacaagaattagaaaagatcaacgatgaa
gctttacgtttaaaaaccttgcgcaacaaactcattgaagaaattcaaatcctaacggat
tcggcgagtgatgcaccacttgaaaaacttcaagaacagcatcaggcacaaacagaaacg
cttcagcaaaatgaacatttagcctctgatctatcgcggcaacttttaaatcataaggat
aatctggagcagattagaaaacttcagaaacagattgatcaggaacttaaaaatggtgaa
cattggttgattctcaataacctgatcggtgatgcgaacgggaataagtttaatgatttt
gcgcaggaccttacactagcgcaattgctacagctggcgaacaagcgcctaaaacatctt
accgatcgttatcaaatagatcaaccggcagatgatgaagacgacagtctggttgcgatt
gatgagcatatgggtgggcaacgccgctcgatcaaaacgctgagcggtggcgagaccttt
attttaagtctggcgctggccttggcattatctgatctcgcttcacgcaatattgagatc
aacagcctgtttattgacgaaggttttggtaccctcgacccggaaacccttgatcaaacg
ctggacacacttgaagttttgcaagccgaatcttcaaaaatgatcggggtgatcagccac
gtagatagtttaaaagagcgcattgcaacgcagattcaacttacgcaaaatgggcaaggt
tatagcagtctaaaaatcgtataa
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