Leeuwenhoekiella palythoae: LDL79_13830
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Entry
LDL79_13830 CDS
T07563
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpal03009
]
LDL79_13830 (rimO)
Enzymes [BR:
lpal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LDL79_13830 (rimO)
Ribosome biogenesis [BR:
lpal03009
]
Prokaryotic type
ribosomal protein modification factors
LDL79_13830 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UBZ09870
LinkDB
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Position
3231844..3233151
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AA seq
435 aa
AA seq
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MRTKTLKKNKINVVTLGCSKNVYDSEVLMGQLRANNKEVVHEEEGNVVVINTCGFIANAK
EESVNTILDYVQKKEDGVVDKVFVTGCLSERYKPDLQKEIPNVDQYFGTTELPGLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIEHLVTEAEKLA
ANGIKELILIAQDLTYYGLDLYKERALAKLLRELVKVEGIEWIRLHYAFPTGFPMDVLDV
MNEEPKVCFYLDIPLQHISTKLLKSMRRGTTYEKTNALLKTFRERVPQMAIRTTLIVGYP
GETQEDFELLRDWVKEMRFERLGCFTYSHEENTHAYTLEDDIPEEVKMERANEIMAIQSQ
ISWELNQEKIGKEYRIVIDRKEGNYFVGRTEFDSPDVDNEVLIDATQHYLKTGEYVTVTI
TDAEDFDLYAAPVSK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactaaaacccttaagaagaataaaataaacgtggtgactttaggttgttctaaa
aacgtttatgatagtgaagtgttgatgggccaattacgtgcaaacaacaaagaggtggtg
cacgaggaagaaggtaatgtggtggtgatcaatacctgtggttttatcgctaatgctaaa
gaagaatctgtaaataccattcttgactatgtgcagaaaaaagaagatggtgtagtagat
aaagtttttgttacaggctgtctttctgagcgttataagcccgatttgcagaaggaaatt
cctaatgtagatcagtactttgggactacagaattgccaggtttactaaaagctttaggt
gcagattacaagcacgaattgataggcgagcgtcttaccaccacgcctaaaaactacgct
tatttaaaaattgctgaaggttgcgaccgcccttgttcgttttgcgcgattccgttaatg
cgcggaggacacaagagtacgccaattgaacatttagtaactgaagctgaaaaacttgct
gcaaacgggattaaagaattgattctaattgcacaagatttaacctattacggactagat
ctgtacaaggagcgtgcgttggcaaaattattacgcgaattagtaaaggtcgaagggatt
gagtggattcgcttgcactatgcatttcctaccggtttcccgatggatgtgcttgatgtg
atgaatgaggagccaaaagtgtgtttttacttagatattccgttgcagcatatttcgact
aaattgttaaagtcgatgcgtcgtggaaccacctacgaaaagactaatgcactgctgaaa
acctttagagaaagagtgccgcaaatggcgatcagaactactttgatcgtgggttatccc
ggcgaaactcaagaagattttgagttgctgcgcgattgggtaaaagagatgcgttttgag
cgtttaggttgttttacttattcacacgaagaaaatacccacgcctatactcttgaagat
gatattccggaagaggtaaaaatggaacgtgctaatgagattatggcgatacaatcgcaa
attagttgggaattgaatcaggagaaaataggaaaggaataccgcatcgtcatcgaccga
aaagaaggaaactactttgtaggccgtaccgaatttgattcaccagatgtagataacgaa
gtgcttatagatgctactcagcattatttgaaaacgggcgaatatgtaactgtaactatc
actgatgcagaagattttgatctgtacgctgcgccggtaagtaaataa
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