Leeuwenhoekiella palythoae: LDL79_13900
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Entry
LDL79_13900 CDS
T07563
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpal02000
]
LDL79_13900
Transporters [BR:
lpal02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LDL79_13900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
TPR_8
TPR_6
TPR_2
TPR_16
TPR_1
TPR_12
Motif
Other DBs
NCBI-ProteinID:
UBZ09883
LinkDB
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Position
3250927..3252474
Genome browser
AA seq
515 aa
AA seq
DB search
MKKHTIKVFLIALTTSLFYSCGDELEIINPNRLAADAYYTNEDQAIAAVDAIYNTLIIDG
LYQRMTPVIGDGRSDETKSRSPWAFLQQTSNFTVPGTDDAVGWCYEGYYITVNRANQALE
NIPLIEEMDEDLRGRLLGQAYFLRALAYFNLTNIYDNVPLVLSVPKSEDDFFPSNQEVTQ
ATIYAQVEADLTEAIASLPADYTSVSGADSGHVGRATLGAAQSLMGKLKLYQGDYDAALA
YFRTVVESQRYDLAANYQDLFSQDPSVEAANPGRIFWAEFTQSLNSVFNWGGDPSVNWRQ
FIALAPTYSGADFYDFFPTQFLVDELSSERTVDGNLDPRYAATILSYNEEEGLTQAYGRD
YFLDRNLNYIAKYTLANSGGDPFTAGINYHVIRFADVLLMYAECLANTGDIPTAAAQVQR
VRDRANLPDREAEFAGYNLTQFMNQLAHERVTELAIEGLRYYDIKRWGWLEDSSRLSQLQ
ANDDEFDTFANGREYQPLPQGELDRNPNLVPNSAN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacacgataaaagtttttctaattgcgcttaccacaagcttgttctacagc
tgtggtgatgaattagaaatcataaacccaaaccgcttggcggctgatgcgtactatacc
aatgaagatcaggcgatagctgcggtagatgcgatatacaatacgttgatcatagacggc
ttgtaccagcgtatgacgccggttattggcgacggtcgaagcgatgaaactaaatctaga
agtccgtgggctttcttacaacagaccagtaatttcacagttcccggtacagacgatgct
gtaggctggtgttatgaggggtactatatcacggtaaaccgtgccaatcaggctttagag
aatataccgttgattgaagagatggatgaagatctgagaggtaggttattaggtcaagct
tattttttaagagccttggcatattttaatctaactaacatttatgataatgttccttta
gtattgagtgttcctaaaagtgaagatgatttctttccttcaaatcaagaggtgactcaa
gctactatttatgcgcaagtagaggcagaccttactgaagctatcgcaagtttaccggca
gattatacttcagttagtggtgcagatagtggtcacgtaggtagagcgactttaggtgca
gcacaatctttaatgggtaaattaaagctatatcaaggcgattatgatgctgcgttagcc
tattttagaacagttgttgaatcacaacgctatgatctagctgcgaattaccaagatctt
ttttcacaggatcctagcgtagaagcggcaaatccgggtcgcattttttgggctgaattc
acacagagtttaaattcggttttcaactggggtggtgatcctagtgtgaactggagacag
tttattgctttggcacctacctattcaggagctgatttctatgactttttccctacgcag
tttttagttgatgaattatcatcagaaagaaccgtagacggaaatttagatccacgttat
gcggcaactatcttaagctacaacgaagaagaaggtcttacacaagcttacggtcgtgat
tatttcttagaccgaaacttgaattatatcgcaaaatatactttggcaaattcaggaggt
gatccgtttaccgctggtattaattaccacgtgattcgttttgcagatgtattgttaatg
tatgctgaatgtcttgcgaataccggtgatattcctactgcagcggcacaagtacagcgt
gtgcgtgatcgtgcaaatcttccggatagagaagcagaatttgcggggtataacttgact
cagtttatgaaccaattagcgcacgagcgtgtaaccgaattagccattgaagggttacgc
tactacgatattaagcgctggggatggttagaagattcttcaaggttatcgcagttacaa
gctaatgatgatgagtttgacacctttgccaacggtagagaataccagccgttaccacag
ggtgagttagaccgtaatcctaatttagttcctaactctgctaattaa
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