Leishmania panamensis: LPMP_050140
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Entry
LPMP_050140 CDS
T06539
Name
(RefSeq) nucleolar RNA helicase II, putative
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_050140
03036 Chromosome and associated proteins [BR:
lpan03036
]
LPMP_050140
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPMP_050140
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
Pre-60S particles
Helicases
LPMP_050140
Chromosome and associated proteins [BR:
lpan03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LPMP_050140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Cas3-like_C_2
ERCC3_RAD25_C
ResIII
Motif
Other DBs
NCBI-GeneID:
22572092
NCBI-ProteinID:
XP_010703777
UniProt:
A0A088RI39
LinkDB
All DBs
Position
5:43550..45619
Genome browser
AA seq
689 aa
AA seq
DB search
MPRRAREESDEAKPHHTTKFTNSSDDDEPVKVSKTHTKASDHHNDIAAEKRQRTDESSKV
AAAAAVTRAEVKDGEMPNNGCAATARPFSEFEMNPIVVKALQSRGIESMFPVQALTFNAI
MRNTDVLVQARTGSGKTLAFGIPIVERLLKLQSHLTRGRGPAAVIFCPTRELAIQVQDVL
CGISCGLIVTALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDE
ADHMLDIGFKDDIELLLSQVAEQNGSTNAEKTVHQTLLFSATVPEWVHTCSFIAKDKEFI
DMVGKEAVRTASTIKFYRRKCNFSEISSMLADLIKVYSGAHGRTLVFTNTKKDCHDLSIN
NTKLDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLPMVDLVIQCAPPSDI
DAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLPAPTREEILKAVARD
AAEDLARVERRATNLFMEQAAELLKDADPVEILASALAVMSGYTSNITTRGLITGTPGYV
TVQMTSDRPLPIPVYCSILRNNLGDDTFMRCRDITLLQDDPGCVFDVLEQFAEGVMNTPM
RGITFQRIESLPPIIARELNSSRGGRGGFGNGGGYGGGRGGGRGGFSNGGGYGGGRGGGR
GGYSNGGGYGGGRGGGRGGGRGGGFQRRY
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgggcgcgcgaggaaagcgacgaggccaagccgcaccacaccacgaagttc
accaatagtagcgacgacgatgagccagtgaaggtgtcgaagactcacaccaaggcgtcg
gaccaccacaacgacattgccgcagagaagcggcagcgcacggatgagagctccaaggtt
gcggcagcggcggcggtgactcgtgcagaggtgaaggacggagagatgccgaacaacggc
tgcgccgccacggcacgtcccttctcggagttcgagatgaacccaatcgtcgtcaaggcg
ctgcagtcgcgcggcatcgagtcgatgtttcccgtccaagccctcaccttcaacgccatc
atgcgaaacacggacgtccttgtgcaagcccgaaccggcagcggtaagacgctggcgttc
ggtatcccgatcgtggaacgtctcctgaagctgcagagccacctcacccggggtcgcggc
ccggctgctgtgatcttctgccccactcgcgagctggccatacaggtgcaggatgtactc
tgcgggattagctgcgggctcatcgtgacagccctatacggcggcgtcgcctacgcaaat
caggagcgtgtgctgcgcagcggcgtcgacatcgtcgtggccacccccggccgcgcgaag
gacttcctggagaaaggcacattgcattttgaccgcgtcgtgatggcgtgcctcgacgag
gctgaccacatgctggatatcggcttcaaggacgacatcgagctgctgctgtcgcaggtg
gcagagcagaacggctccaccaatgcagagaagacagtgcatcagacgctgctcttctcc
gcgacggtgccggagtgggtgcacacctgctccttcatcgccaaggacaaggagttcatc
gacatggtcggcaaggaggcggtgcgcacggccagcacgattaagttctatcgccgaaaa
tgcaacttcagcgagatctcctcgatgctggctgacctcatcaaggtgtacagtggtgcc
cacggccgcacccttgtcttcaccaacacaaagaaggactgccacgacctctccatcaac
aacactaaactggactcgcagtgcctccacggggatatgcagcaggagcagcgcgagagt
accatgaagagcttccgagacaacaagttcagcgtcctcatcgccactgacgtggctgcc
cgcggccttgacctgcccatggtggacctcgtcatccagtgcgccccacccagcgacatc
gacgccttcattcaccgcgccgggcgtaccgggcgcgctggccgcaagggcgtgtgcgtg
ctgctctaccagccgcgcgaggagtacgttgtcgagcgcatcgagcgccacgcgaagatg
aagttcgacgtcctgccggctcccacgcgtgaggagattctgaaggccgttgcacgggac
gccgctgaggacctggcgcgtgtggagcgccgtgcaaccaaccttttcatggagcaggca
gccgagctgctgaaggacgcggacccggtcgagatcctggcctcagcgctcgccgtaatg
agcggctacacgtccaacatcaccacgcgcggtctcattactggaacgccagggtacgtg
acagtgcagatgacgtccgatcgcccgctgcccattccagtgtactgcagtatcctccgc
aacaacctcggcgatgacacgttcatgcgatgccgcgacatcacactgctgcaggacgac
ccgggttgcgtgtttgacgtcttggaacagtttgccgagggtgtcatgaacacaccaatg
cgcggcatcaccttccagcgcatcgagtccctccccccaatcattgcgcgcgaactaaac
agcagtcgcggcggccgtggcggcttcggcaacggcggtggctatggcggaggtcgtggt
ggcggccgtggcggcttcagcaacggcggtggctatggcggaggtcgtggtggcggccgt
ggcggctacagcaacggcggtggctatggcgggggtcgtggcggcggtcgtggtgggggt
cgtggcggcggtttccagcgccgctactga
DBGET
integrated database retrieval system
