Leishmania panamensis: LPMP_070380
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Entry
LPMP_070380 CDS
T06539
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lpan
Leishmania panamensis
Pathway
lpan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LPMP_070380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpan03041
]
LPMP_070380
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_070380
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPMP_070380
Spliceosome [BR:
lpan03041
]
Complex A
U1 snRNP components
U1 related factors
LPMP_070380
Complex B
LPMP_070380
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
Pre-60S particles
Helicases
LPMP_070380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
GOLGA2L5
CMS1
Motif
Other DBs
NCBI-GeneID:
22572373
NCBI-ProteinID:
XP_010704046
UniProt:
A0A088RKP9
LinkDB
All DBs
Position
7:complement(147506..153817)
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AA seq
581 aa
AA seq
DB search
MSDYGDAQHNGGDGGGRGEGGYGGGRDGGYGGGYGGGRGGDRYRSGGYSGGRGYGGGRGG
DRFHDRHGGLGANLHRIDWDAVQKVATQWNFYKPQKPRSEEEIATWLRENSITIYGDRVP
QPMLEFSDLVAPDAIHQAFMDAGFQRPTPIQSVSWPVLLNSRDIVGVAKTGSGKTMAFMI
PAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKSLTRVPSIMTTCVYGGTPKGP
QQRSLRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQI
RTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHVFVVEGYHKEEKM
EEILRQVGPQRVLVFVKTKKSCDILQDRLGRALRQTVLAIHGDKLQSSRDYVLDRFRKDE
RAILVATDVAARGLDIKNLDVVVNYDMPLNIEDYVHRIGRTGRAGKTGDAYSFVSSADNS
KTIRDLIELLLRAKQEVSPELYAVCQYARNDGGRSGRGYGGHGYGGRGYGGGGGYRGGRG
YGGGGGYRSGRGYGGGEFGRAPAGGAPGGGGAPRSESFTPY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactacggtgacgctcagcacaacggcggcgacggcggtggccgcggtgagggt
ggctacggtggtggtcgtgacggcggctacggtggtggctatggaggtggtcgcggggga
gatcgctaccgcagcggcggctacagtggtggtcgtggctacggcggcggccgcggcggc
gatcgcttccacgaccgccacggcggccttggcgccaacttacaccgaattgactgggac
gccgtgcagaaggtggcgacgcagtggaacttctacaaacctcagaagccgcgcagcgag
gaggagattgcgacgtggctgcgtgagaacagcatcaccatctacggtgaccgcgtacca
cagccgatgctagagttctccgacctggtggcgccggatgcgattcaccaggccttcatg
gacgctggcttccagaggccaacccccattcagtccgtctcctggccggtcctgctgaac
tcgcgcgatattgtcggcgtggccaagacgggctctgggaagacgatggccttcatgatt
cctgcggcgctgcacattatggcgcagcctccgctgcagcctggtgatggtcccatcgcc
cttgtcctcgcaccaactcgcgagctggcagtgcagatcgagacggagacacgcaagtcg
ctgacgcgcgtgccaagcattatgacgacgtgcgtgtacggtggcaccccgaaggggcca
cagcagcgttccctgcgcgctggtgtgcacgtctgcatcgcaaccccgggtcgcctgatc
gaccttctggagacgaactgcacaaatctgctgcgcgtcacctacctcacccttgatgag
gcggatcgcatgcttgacatgggcttcgaggaccaaatccgcaagatctgctcgcagatt
cgcaccgaccgccagacgctcatgttctcagcgacgtggccgcgcgaaattcgtaacctc
gctgccagcttccagaaggactttgtgcgtgttcacatcggctccgaggagctcgtggcg
aatgcggatgtgcaccagcatgtcttcgtcgtcgagggatatcacaaggaggagaagatg
gaggagattctccgccaggtcggaccgcagcgtgttctggtcttcgtaaagacgaagaag
tcgtgtgacattctgcaggaccgacttggccgcgcactgcggcagacggtgctggccatt
cacggcgataagctgcagtcgagccgtgactacgtgctagaccgcttccgcaaggatgaa
cgcgcgattctcgtcgccaccgacgtggcagcgcgtggcctcgatatcaagaacttggac
gtggtggtgaactacgatatgccactgaacattgaagattatgtgcatcgtattggtcgt
acgggtcgtgctggtaagaccggcgacgcctactcctttgtttcctcggctgataacagc
aagaccatccgtgacctgatcgaactgctgctgcgtgcgaagcaggaggtgtcaccggag
ctctacgccgtctgccagtacgcgcgcaacgatggaggtcgcagcggacgtggctacggc
ggacatggctacggtggtcgtgggtacggtgggggtggtggctaccgtggcggtcgtggc
tacggcggcggtggtggctaccgcagtggccgtggctacggtggtggtgagtttggtcgc
gcaccggccggcggtgctcctggtggtggtggtgccccgcgcagcgagagcttcacgccg
tactag
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integrated database retrieval system
