Leishmania panamensis: LPMP_130390
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Entry
LPMP_130390 CDS
T06539
Name
(RefSeq) RNA helicase, putative
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_130390
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPMP_130390
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LPMP_130390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_30
AAA_19
AAA_22
SWI2_SNF2
PhoH
SLFN-g3_helicase
Cas3-like_C_2
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
22573149
NCBI-ProteinID:
XP_010697121
UniProt:
A0A088RKJ7
LinkDB
All DBs
Position
13:145691..151651
Genome browser
AA seq
1986 aa
AA seq
DB search
MTQGHLAEYIFTGGVQTNSFVSECMQAQRPVALLTHSGEPLSPRGDRVGGSGRSAYQEQR
KISLDMLLSSVDDIVSQVYVNFDEDLTKLLLNALDRVTACETLDQKERAKVRVIDELLEV
LGDSHYDLLQCIMYRPREVFLRLLEEFCTLEDAGDAGVSQSSGGPKGLTVRVVKNTNQRS
QGQDVVINDAGKLTDQKWLAHMNKRYRVLMQESELDELFKRDFSVTGSIMPAGATVTKKS
GHVRIHIPPPTQEILPDSKRVCIATSLPEWTHPAFLSITHLNTIQTTIFETAFHTSQNML
VCAPTGAGKTVCALLVMLRCISEHFEGGVLDRDFKIIFVAPMKALAQEMVENFSRRLAPF
MMKVRELTGDMQLTKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNE
ERGPVLEALVARTLRHGELNPEQRIRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYR
PVPLEQTFIGVQNASGPQKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTIGLAKY
FIEESKCRGEEQLFQYRGVMPSAIDKKGRTLQGRDLASLFIAGFGAHHAGLVRYDRTSTE
GFFRDGYLRVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGR
PQFDTSGHGIIISDDKEVSHFLRLIAHALPIESQLQGKLCDHLNAEVNAGTISSVMEASS
WLEYTYMWQRIRVNPLTYGLKVNNVRKDPELKAVRYGMINTSFTDLAIAGMVRYNPETGS
VESTDLGRLASHYYITYESISIFNEKMRRPDDTWIDTLDMGTAMNIAASAKEFSQLKVRQ
EELDELQYLHQLLPKQVREYRVSDESADETSTQWKVTTLLKAYINRLSVETHSLSSDMVY
VLQNMPRICRALFEIELERGHPLTTYTYLTLCKCIEHRCWDFEHPLMQFANWSHRVNITD
AVWINLNKRNPSMQLLQEMTAKEAGEMVHNVRAGRDIVDLVSKFPSVNIDIDVQPITRSI
LRVKVTIEANFVWSRDLSGNSELFWLLVEDQDNHFIFHHESVTLTRKEVESGTPHVVNLA
VPIVPQYDMYSVRLYSDRWMGCKEDYTFSIGHLHLPEDSQMTTKLLPLGPLRLHVIPEEY
HVMYSNYRQFNAVQTQIFHAMFHTDQNVFLGAPTGSGKTIAAEMAILRVFEQYPGKKVVY
IAPLKALVKERLRDWKVRMTLVGRSVVELSGDATPDISALAKADILCTTPEKWDGISRNW
QVRSYVTAVKLVVFDEVHMLGTDRGPILEVIVSRMRYIGWSLKAPIRLVGLSTAVSNPGD
LSSWLGVEKKWAVFNFDPSVRPVPMTVHIAGYHGKNYCPRMATMNKPTYNAICEKSPTQP
VLVFVSSRRQTRLTAMALIGFLLMEDNTAKWVHMDVDQVQKYTSRLDDPYVKHCLQFGVG
IHHAGLLEGDRTIVEEAFLSNRIQVLVATSTLAWGVNLPAHMVVVKGTEYFDAKTNSYVD
FPITDVLQMIGRAGRPQFDTEGVAQVLCHEPKKGFYRKFLYDPFPVESALHKQLHVHINA
EIVSGTINTRQDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGVLADLER
CGCIEQPDAMDEDFDPDAIQYTILGKLCSYYYISHITVDLFNRSIEPDHSCGELLRLMCD
AEEFNELPVRHNEDKLNMQLARQLPLPVRDAEVDSPHAKAFLLFQALFERAPMPITDYIT
DQKSAMDNAVRVIQAMVDVAANNGHLYAALRCMALMQCMVQARWWDDNSLLQIPNVDKAM
LPVIEKECDGVRGAAELANRPLAVLHSFQKVLEMPIFGLRERDVNESMEAVRGLPLIQVD
LTIQQQQPTAAEETGANDEEAVLTYELTVHLQRLSFGQKSVIAPHFSKAKDEQYWVVVGH
EPTGELVALKRVNRLRQSSTTTLQIEWDEDWVQYNPDGTVELNMYLVCDSYIGMDQQYSF
ILPRSN
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaggccacctggcagagtacattttcacgggtggcgtgcagacgaatagcttc
gtgtcggagtgcatgcaggcgcagaggcccgtggctctgctcacccactccggcgagccg
ctgtcgccccgtggggatcgagtcggtggatctggccgctcggcgtaccaggagcagcgt
aagatttcgttagatatgctactctccagcgttgacgacatcgtgtcacaggtgtacgtg
aactttgacgaggatctcaccaagttgctgctcaacgcactcgatcgcgttacggcctgc
gagaccctggatcagaaggagcgagcaaaggtgcgtgttatcgatgagctgctcgaggtt
cttggagacagtcactacgacctgctgcagtgcataatgtaccgccctcgcgaagtcttc
ctccgactcttggaggagttctgcaccttggaggatgccggggatgcgggggtgagccag
tcctctggcggtccaaagggactgacggtgcgcgtagtgaagaacactaatcagcgctca
caggggcaggatgtggtgatcaacgacgcaggcaagcttactgatcagaagtggctcgcc
cacatgaacaaacgctaccgtgtcttgatgcaggagtcagagctggacgagctctttaag
cgggacttcagcgtgaccgggtccattatgccggcaggcgctactgttaccaagaagtcc
gggcatgtgcgcattcacattccccctccaacacaggagatactgcctgatagcaagcgc
gtctgtatcgcgacgtctctgccagagtggacgcacccagcctttctctccattacgcac
ctcaacacgattcagacaacgatcttcgagacagcgtttcacacctcgcagaacatgctg
gtgtgcgcgccgacgggtgcgggtaagacggtgtgtgcgctgcttgtgatgctgcggtgc
atcagcgagcacttcgagggcggtgtactagatcgagacttcaagataatttttgttgcc
ccaatgaaggcgcttgcgcaggagatggttgagaacttctcgcggcgcctagcgccgttc
atgatgaaggtgcgcgaacttacgggcgacatgcagctgaccaagcgggagctggcggag
acgcaagtaattgtgacaacgccggagaagtgggatgtcatcacccgcaaacagagcaat
gaggagctggtaagccaagtgcggctcatcatcatggatgagattcacctgctgaacgaa
gagcgcggtcctgtgttggaggcgttggtcgcgcgcacactgcggcacggcgagctgaat
ccggagcagcgcatccgcctggtgggcctctccgccacgctgcccaactacaaggatgtg
gcgaacttcctgcaggcggacttacgggagggtctcaaagtattcggcccggagtatcgc
cctgttcccctggagcagacttttattggtgtgcagaacgcatctggaccgcagaagcgc
aacaaggagttcgagctcgatcgcctggcgtatgaggaggtggtgaagaacgtgcgggag
gggcaccaggtgatggtgtttgtgcactcgcggaagcagacgatagggctggccaagtac
tttatcgaggagtcaaagtgccgtggggaggagcaactgtttcagtacagaggtgtaatg
ccatcagcgatcgacaagaagggccgcacgcttcaagggcgtgacttggcctccttattc
atcgccggcttcggcgcgcaccacgctggcctcgtccgttacgatcgcaccagcacagag
ggcttcttcagggacgggtatctgagagtactgtgctgcacaagtaccctggcgtggggc
gtaaaccttccggcgcacacagtggtgattcgtggcacgcaaatgtacgaccccaagcgc
ggtgggctcgtctccatctcggtgctggatgtaatgcagatcttcggccgcgctggccgt
ccgcagttcgacacgagcggccatggcatcataatatccgatgacaaggaagtgagtcac
ttcctccgactcattgcacacgccctgcccatcgagagtcagctgcaaggcaagctgtgc
gaccacctgaacgctgaggtgaatgccggtactatatcttccgttatggaggcctcttcg
tggctggagtacacgtacatgtggcagcgaattcgagtgaatccgctaacgtatgggctg
aaagtaaacaatgtccgcaaagacccggagctcaaggcagtgcggtacgggatgattaac
acttcgttcaccgacctcgccattgcgggtatggtgcgctacaacccggagacgggctcg
gtggagagtaccgatctcggacgtctcgcgagccactactacatcacctacgagagcatc
agtatattcaacgagaagatgcgccgccccgatgacacgtggatcgacacgttggacatg
ggcactgccatgaacatcgctgcctcagcaaaggagttcagccagctgaaagtgcggcag
gaggagctggatgagcttcagtacctgcaccagctgctgcctaagcaggtgcgtgaatac
cgggtgagtgacgagagcgccgacgagacgagcacgcagtggaaggtgacaacgctgctc
aaggcgtacatcaaccgcctttctgttgagacgcactctctgtcatctgacatggtgtac
gtgctgcagaacatgccccgcatctgccgcgccctcttcgagattgagctggagcgtggc
caccctctcaccacgtacacgtacttgacgctgtgcaagtgcattgagcaccgctgttgg
gactttgagcacccattgatgcagttcgcgaattggagccaccgggtgaacatcacggac
gctgtgtggataaacttgaacaagcgcaacccaagcatgcaactactgcaggagatgacg
gcgaaggaggcgggggagatggtgcacaacgtgcgcgccggtcgcgacattgtcgatctg
gtgtcaaaatttccctcggtgaacatcgacattgatgtgcagcccatcacccgctccatt
ctgcgtgtcaaggtgacgattgaggcgaattttgtgtggagtcgcgacttgtccgggaac
tctgagctgttctggcttctagtggaggaccaggacaaccacttcattttccaccacgag
tcggtcacgctcactcgcaaggaggtggagtctggcacgccgcatgtggtgaatcttgct
gtcccgattgtgcctcagtacgacatgtactcggtgcgtctctacagtgaccgctggatg
ggctgcaaggaggactacaccttttccattggccacctgcaccttccggaggactcgcaa
atgacgacgaagctgctgccgctgggcccgctgcggctccacgtgatcccagaggagtac
cacgtaatgtacagcaactaccgccagttcaacgcggtgcagacccaaatcttccacgca
atgttccacacagaccagaacgtcttcctcggcgccccgacgggcagtggtaagacgatt
gctgcagagatggccatcctccgcgtgtttgagcagtatcctggcaagaaggtggtgtac
atcgcgccgctcaaggccctcgtgaaggagcggcttcgtgactggaaggtccgcatgacg
cttgtgggacgctccgtggtggagctgtcgggtgatgcgacgccggacattagtgcgctc
gcaaaggcggacattttgtgcacgacaccggagaagtgggatgggatttcgcgcaactgg
caggtacgcagctatgtcacggccgtgaagctggttgtgtttgatgaggtgcacatgctg
ggcaccgaccgtggcccgattctggaggtgattgtaagccgcatgcgttacatcgggtgg
agcctgaaggcgccgatccgcttggtgggtctctccacggctgtctccaacccgggtgac
ctgagctcgtggcttggtgtggagaagaagtgggccgtgttcaactttgacccgtcagtg
cgtccggtaccgatgacagtgcacattgcgggttaccacggcaagaactactgcccccgt
atggccaccatgaacaaaccgacgtacaacgccatttgcgagaagagcccgacgcagccg
gtgcttgtattcgtatcatcccggcggcaaacgcgactcacagccatggccctcatcggt
ttcctgctgatggaggacaacacggccaagtgggtgcatatggatgtggaccaggtgcag
aagtacacctcgaggctagatgacccgtacgtgaagcactgcctgcagttcggcgtcggc
atccaccacgccgggttgctggagggcgaccgcacgattgtcgaggaggccttcctctca
aatcgcattcaggtgctggtggcgacatcgacgctggcatggggtgtcaacctccctgcg
cacatggttgtggtgaagggcaccgagtacttcgacgccaagacgaactcctacgtggac
ttcccgatcacggatgtgctgcagatgatcggccgtgccgggcgcccgcagtttgatacg
gagggcgtggcccaggtgctgtgccacgagcccaagaaaggcttctaccgcaagttcctc
tacgaccccttcccggtggagagcgcgctgcacaagcagctgcacgtccacatcaatgct
gaaattgtgtcggggacgatcaacactcgccaggatgcggtgaactacctgacgtggacc
tacctcttccggcgaatcgcacgcaacccatcctactacggactggaggatggctctccc
aaggcggtgacgatcttcctctccaccctggtgaagggcgtgctggcggaccttgagcgc
tgcggttgtattgagcagccggatgcgatggacgaggattttgacccggatgcgatccag
tacaccatactgggcaagctgtgttcgtactactatatttcccacatcacggtggacttg
ttcaaccgcagtatcgagccggatcattcctgcggcgagctgctgcgtctcatgtgcgac
gcggaggagttcaacgagctgccagtgcgtcacaacgaggacaaactgaacatgcaactg
gcgcgtcagctaccgctgcccgtccgtgatgcagaggtggacagtccgcacgccaaggca
ttcctcctttttcaggcgctctttgagcgcgcgccgatgcccatcacggactacattacg
gatcagaagtccgccatggacaacgcggtgcgtgtaattcaggctatggtagacgtggcc
gccaacaacggccacctgtacgctgcgctgcgttgcatggcgctcatgcagtgcatggtg
caggcccgctggtgggatgataactctctgctgcagatcccgaacgtggacaaggcgatg
ctgccggtgatcgaaaaggagtgcgatggagtgcgcggcgcggcggagctggcgaatcgc
ccgttagcggtgctacatagttttcagaaggtgctcgagatgcccatcttcgggctgcgg
gagcgggacgtgaacgagtcgatggaggcggtgcgcgggctgccgctcatccaggttgac
ctcaccattcagcaacagcagcctactgcagcggaggagacgggtgcgaacgacgaggag
gctgtcctgacgtacgaactgacggtgcatttgcaacggctttcttttggacaaaagagc
gtcatcgcgccgcacttttcgaaggcgaaagatgagcagtactgggtagtggtcggccac
gaaccaacgggcgagcttgttgccttgaagcgtgtgaatcgactgcggcagagcagcacg
acgacgctgcagatcgaatgggacgaggactgggtacagtacaaccccgacggcaccgtg
gagctgaacatgtatctcgtgtgtgactcgtacatcggcatggatcagcagtacagcttc
atccttcctcgttcaaactga
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integrated database retrieval system
