Leishmania panamensis: LPMP_181070
Help
Entry
LPMP_181070 CDS
T06539
Name
(RefSeq) vacuolar protein sorting complex subunit, putative
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lpan
Leishmania panamensis
Pathway
lpan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LPMP_181070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpan04131
]
LPMP_181070
Membrane trafficking [BR:
lpan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
LPMP_181070
Hops complex
LPMP_181070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
22573997
NCBI-ProteinID:
XP_010697941
UniProt:
A0A088RMZ0
LinkDB
All DBs
Position
18:433204..435120
Genome browser
AA seq
638 aa
AA seq
DB search
MTWCGGHCVAYLQRIQYGGALDEGEDCPCSLFLMNVDEPDNNDCISDLPFDACLLPEKDG
AWVVSREKLFFLQVAPLAVQRVFSVASRAAGAMLVATYDEFMTGDASAVRMLRNLERASG
ALVEAVAECVAAAGFEFDAAQQKRLLRIAAFGRTFCSLCDSSAFVAMSKRLRVRNHLRLE
PLGMIVTDQQLTDLGEARLLQRLTMCNEHQVAFCVAEAIGSDVKLVMLDWAMCRLARVSV
HNKDEEREVAKQIVKKLKACSFTSFAELAQQAKVAGRGTAAVVLLDAEVNPSQQVTMLLS
IGEPDMALKRAIHAADADLVFTVMVHMIRNRGSTALASLTAHKTTCDLLLQYVGVCEGSQ
QLMAECFNKHPRVQAYFHLCSYFREEARLGHALSQSMESGSWEMLQECKGVDIQAAIVST
KRAVEHSPRSQPTTTAFSPIVGSGIPYPLSMIEERFLQLQNNLLEEQTQLMNEYKDYRFL
QGSAADTIRYAFEHGRTSVAQRLKTAFCVPEKMFQRCMLSAYLCTGQWELIDDMSGISSS
KKTLLDGEAFVTALLSYKRPQQAKQYISRIPKIETRMEYYVLCSDWFGAAADCKRHNDPD
LLTQLKDRAKGNPDVLRQIEEGWCTLTQTTGISFPKFF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtgtggaggtcattgcgttgcatatctacagcgaatacagtacggtggcgcg
ttggatgagggtgaggactgcccctgctcacttttcttgatgaacgtcgatgaacctgac
aacaatgactgcatctctgatttaccgtttgacgcctgtcttcttcccgagaaggacggc
gcttgggtggtttcgcgggagaagctgtttttcttgcaggtggcaccgcttgccgttcag
cgcgtcttttctgtcgcttcgagggctgctggggcgatgcttgtcgcaacttacgacgag
ttcatgaccggcgatgcgtctgcggtgcggatgctacgaaatcttgagcgcgcttcaggt
gccctggtggaagcggtagccgaatgcgttgctgcagcgggttttgagtttgatgcggcg
cagcagaagcggctgttgcgaatcgctgcatttggtcgcacattttgttccctctgtgat
tcaagcgcatttgtggccatgtcaaagcgactgcgtgtgcgcaatcatcttcgccttgag
ccgcttggaatgattgtgactgaccaacagctcactgatctcggtgaggcacgccttcta
cagcgtcttactatgtgcaatgagcaccaggtagccttttgtgtggcagaagctattggg
tcagatgtcaagctggtgatgctggactgggcgatgtgcaggctggcgcgtgtctcagtt
cacaacaaggatgaggagcgagaggtcgcaaagcaaatagttaagaagctgaaggcgtgt
agtttcacttcattcgcagagctggcacagcaggccaaggtcgccggccgcggcaccgcc
gcggtggtactgctggatgcggaagtgaacccctctcagcaagtgacaatgctgcttagc
attggcgagcctgacatggccctgaagcgtgccattcacgccgctgacgcggacctagtg
ttcacggtcatggttcacatgatccgcaaccgtgggtccactgcacttgccagcttgaca
gcgcataaaaccacgtgcgatctgcttctgcaatacgtgggggtgtgcgaaggcagtcag
cagctcatggctgagtgcttcaacaagcacccacgagttcaggcatactttcatctgtgc
agctactttcgtgaggaagcacgactgggacacgcactgtcgcagtcgatggaaagcgga
agctgggaaatgttgcaagaatgcaaaggcgtggacatccaggctgctattgtctcaact
aagagggctgtggaacacagcccacgctcgcaaccaacaaccacagccttttctccgatc
gtcggtagcgggattccgtacccgctttccatgatcgaggagcgctttttgcagctgcag
aacaacctccttgaagagcagacccagctcatgaacgaatacaaggactaccgcttcttg
cagggcagcgccgccgacacaatccgctacgcttttgagcatggacgcacttctgttgcg
cagcggttgaagactgcgttttgcgtgccagagaagatgtttcaacgatgtatgctcagt
gcgtacttgtgcactggccagtgggagctcatagacgacatgagcggcatctcgtctagc
aagaagacgctgcttgacggcgaggcctttgtcaccgccttgctttcatacaagcgccca
cagcaggcaaaacagtacatttcgcgcattccaaagattgagacgcgaatggagtactac
gttctctgcagcgactggttcggtgccgctgccgactgcaagcggcacaatgaccccgat
ttgctgacgcagctgaaggaccgcgccaaaggtaatccagatgtactgcgccagattgaa
gagggctggtgcacactgacccaaactacaggtatcagctttcccaagttcttttag
DBGET
integrated database retrieval system
