Leishmania panamensis: LPMP_201720
Help
Entry
LPMP_201720 CDS
T06539
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_201720
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPMP_201720
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
Pre-60S particles
Helicases
LPMP_201720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
22574381
NCBI-ProteinID:
XP_010698373
UniProt:
A0A088S7X7
LinkDB
All DBs
Position
20:complement(778381..780792)
Genome browser
AA seq
803 aa
AA seq
DB search
MSGCETWEAAVQSAAKSKKKGGGFQSFGLDKPLLDAILKKGFSVPTPIQRKAIPPMLQGN
DVVAMARTGSGKTAAFLIPMLNALKAHSKVVGIRGLVLSPTRELSLQTLHNGFALNRFLD
LRFAALVGGDSMEQQFELLASNPDVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFE
LGLQPQIGAIMQKIPESCQRALFSATMPSVLAEFTSAGLHNPVVIRLDSEMTLSDQLKQS
AFLVRNGEKVAALIVLLKRLLHVGEAIVNNAQALIFVESKFHVEYLQMILTTYGISASAV
HGQMDQEARRLAVRSFAKRETTVMVVTDVAARGLDLPLLDNVVNFSFPFNPKLFVHRVGR
VARAGRSGTAYSLMTFEDFPYYIDLMQFIGRPLQSAPVPGDLLFTPDDGCYGRLPEEDIQ
LELDFLKRLHENDVEVRNMARVVEHAHTKFNRTKKKSTHEAIQEARKPQYAFDRTPLHPM
LLERLGSTRLRADEARFDLKRFKPKELFLEMGSKEKLFAICRAETAQSLSRPTKDDGEAE
KGGAPSAAPNENKLSLAERMLQRAQERKKREREGGGSSSSNSLHSDDAVMNVVTHSRQAA
LRQEESIESGAYRDVNFFMVLERRDTLNNAHYSVKDATMDITAETAEEAAQQRQVFAWSK
KKNRYVQMHVNDAKALLKGVKNEAGRAINYKSKLQAYSKWLKKSNMRIQDVGEEEDLVPL
KRAKAAALSSHPQDGEAEGDIVDISDPNQGKKLRIGRKQKRLPKDGHVRSFEEMATMRRK
AEKEKNRLARKKQRHGVGKKKGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtgaaacgtgggaggcagccgtgcagtcggcggccaagtcgaagaagaag
ggcgggggctttcaaagctttggcctggataagccactcctcgatgcgattctgaaaaaa
ggcttctccgtgcccaccccgatccagcgcaaggcaatcccgccgatgctgcaggggaac
gacgtggttgccatggctcgcaccgggtcgggaaagacagcggcgtttctcattccaatg
ttaaacgccctgaaggcacactcaaaagtagttggcattcgcgggctagtgctgtcccca
acgagggagctcagcctgcagaccttacacaacgggttcgcgcttaacaggtttctcgat
ttgcgcttcgctgccttggtgggcggagactcgatggagcagcagtttgagctcttggcg
tcgaaccccgacgtggtcgttgcgacgcccggtcgtcttctgcacatcatggaggaggct
tcgctgcacctcacgagtgttcgctgcctcgttctggatgaggcggatcgcctctttgag
ttgggcctgcagccgcagatcggagccatcatgcagaaaatacccgagtcctgccagcgt
gccctcttttccgcgacaatgcctagcgtattggcggagttcacgagcgctggcctgcat
aacccggttgtcatacgcctcgactcggagatgacgttgagtgaccaactcaagcagagc
gccttcctcgtgcgcaacggcgaaaaggttgccgcattgatcgtactgctcaagcgcttg
ctgcacgttggagaagccatcgtgaataatgcgcaggcgctcatttttgtcgaatccaag
tttcatgtggagtatctgcagatgattctgaccacctacggtatctcagcgagtgcggta
cacgggcagatggaccaggaggctcgtcgccttgccgtgcgcagctttgcgaagcgtgaa
acaactgtgatggtggtcacggacgtggcggcgcgcggtttagacttgccgctgctcgac
aacgttgtcaatttctcctttccctttaacccaaaactgtttgtgcaccgcgtcggccgt
gtagcgcgcgccggtcgctccggtacggcctactctcttatgaccttcgaggactttccg
tactacatcgacctcatgcagttcataggccggcccctgcagtccgccccggtacccggc
gaccttcttttcactccagacgacggctgctacggccgcttacccgaagaggatattcag
ctcgagctcgacttcctcaaacgcctgcacgaaaacgatgtagaggtgcgcaacatggcg
cgagtggtagagcacgcacatacaaagttcaaccgcacaaagaagaagtcgacgcacgaa
gcaatacaggaggcccgaaagccgcagtacgcctttgaccgcaccccgctgcatccaatg
ctgctcgagcgcctcggcagcacccggctacgcgctgatgaggcgcgcttcgacctcaag
cgtttcaagccgaaggagctcttcctagaaatgggctcgaaggagaagctgtttgcgatt
tgccgggcggaaacagcgcagtctttgtcacggcctactaaggacgatggcgaggcggag
aaaggcggagcgccctcagcggcgccaaatgagaacaagctctctcttgccgagcggatg
ctgcagcgtgcgcaggagcgcaaaaagcgtgagcgcgaaggcggcggcagcagcagtagc
aattcccttcacagcgacgatgcggtgatgaacgtggtgacccattcgcgtcaagcagca
ctgagacaggaggaaagcatcgagtccggcgcctaccgtgacgtgaacttcttcatggtc
ctggagcggcgtgacaccctgaacaacgctcactactctgtcaaggatgcgacaatggat
atcactgccgagacggctgaggaggctgcgcagcagcggcaggtgtttgcgtggagcaag
aaaaagaatcgctatgttcagatgcacgtcaatgacgccaaggccctcctgaaaggcgtg
aagaacgaggccggtagggccatcaactacaagagcaagctccaggcctactcgaagtgg
ctgaagaagagcaacatgcgcattcaagatgttggcgaagaggaggacctcgtgccgctg
aagcgcgccaaggcagcagccttgtcgtcccacccacaagacggtgaggcggagggcgat
attgtagatattagcgacccgaaccagggcaagaaactccgcattggtcgaaagcaaaag
cgacttcccaaggatggccatgtacgctctttcgaggagatggcgacaatgcggcgcaag
gcagagaaggagaagaaccgcttggcgcgtaagaagcagcgccatggcgttggaaagaag
aagggcaagtaa
DBGET
integrated database retrieval system
