KEGG   Leishmania panamensis: LPMP_204230
Entry
LPMP_204230       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
lpan  Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lpan03009]
    LPMP_204230
Ribosome biogenesis [BR:lpan03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    LPMP_204230
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd EIF3I WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML WDR55 NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd PEP5_VPS11_N WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_WDR19_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_2nd WDR54 Beta-prop_LRRK2 Beta-prop_WDR35_2nd Beta-prop_IFT122_2nd Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 22574634
NCBI-ProteinID: XP_010698624
UniProt: A0A088RP94
LinkDB
Position
20:complement(1724162..1725394)
AA seq 410 aa
MLFLARDGMRGQLVDVETPMVLRSYAIGEVARNALAYSPISQAVIVHQTRNCALFLSAAT
QQPLQRSFTPELVTCCAVTRCGTFLVAGTVNGTILLWNLQSGELIKSYKGHLRAVHCAAI
SADDSLVATVSEDSVCKVWNLATLASLRMREIVPRCVFTGHSLAVTCCTFLHHSNVLLTG
SRDRTCRLVDPHTGEQFRCITVGDAVTAITASLDDASIVAGTQKGFLFFSELYEPSAGLA
IEPERTGEHLETILRPPSADGHNSPIIFLQCLSSTPSLVLTASEGGAVLSFDIQSGRLIK
ECVSPQKGRLLGCCVVPRAALLVRGACAPLEKNPVDPSRGNYHVTQCALAMRQVKRGEKR
NRDGCAVRLGPDDEADANALAEVRAKVKELCDLRAQLERRLRKLSAEKRH
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgctgtttcttgcgcgcgatggcatgcgtggccagttggtcgatgtggagacgccgatg
gttctgcgcagctacgcgattggtgaggtggcgagaaacgccttggcttactcccccatt
agtcaagcggtcatagtgcaccagacacgcaactgtgctctttttctttctgcagcgacg
cagcagcctcttcagcgcagcttcacgccggaactggtcacctgctgtgcagtcactcgg
tgtggcactttcctagttgcaggcacagtgaatggcaccatccttctgtggaacctgcag
tctggcgaactcatcaagagctacaagggccacctgcgtgcggtgcactgtgctgcgatc
tcagccgatgactccctcgtcgcgactgtgtccgaggactcggtgtgcaaggtatggaat
ctggcaacactggcctcacttcgaatgcgcgagatcgtgccaaggtgcgtcttcaccggc
cactcactcgccgtcacctgctgcactttcctccaccactcaaatgtgcttctcaccggc
tcccgagaccgcacctgtcgtcttgtggatccccacacaggagagcagttccgctgcatc
actgtcggtgatgctgtcaccgcgatcactgcgagtcttgacgatgcctcaatcgtcgct
ggcacacaaaagggattcttgttcttcagcgagctttacgagccttccgccgggcttgcc
atcgagccagagagaactggtgaacacctagagacgatcttgcgaccacccagcgcagat
ggccataactctccgattatttttctgcagtgcctgtcgtccacgccgtcgctcgtgctc
accgccagtgaaggtggcgccgttctgtcgttcgatatccaaagcgggcggctcataaag
gagtgcgtcagcccccaaaagggccggctgctgggctgttgcgtggttccgcgagctgcc
ctgcttgtaagaggggcatgtgcgccgctggagaagaaccctgtcgatccatcgcgaggc
aactatcacgtcactcagtgcgctctcgcgatgcgccaagtcaaacgtggcgagaagcgg
aatcgagatggctgtgcagtgcgacttgggccagatgacgaggcggatgctaatgctcta
gcagaggttcgtgctaaggtaaaggagctgtgcgatcttcgtgcgcagctcgagcgccga
ctacgcaagctttctgctgagaaacgccactga

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