Leishmania panamensis: LPMP_205030
Help
Entry
LPMP_205030 CDS
T06539
Name
(RefSeq) pseudouridine synthase, putative
Organism
lpan
Leishmania panamensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
22574715
NCBI-ProteinID:
XP_010698702
UniProt:
A0A088RQ55
LinkDB
All DBs
Position
20:2040587..2045332
Genome browser
AA seq
1581 aa
AA seq
DB search
MNRSKWSLRRLILGLSVEDAQSKFDTPESRSILRVAHERYNQGIYHELQVAQRQRNGLAP
ERKCHISRFTKPSVPGFQAYLKGAPDDYVIREVWDDDEDVVIGESGTLRTKSKVALSHSS
AISNAPTVSSKIKQEQDAFRMTKALILKTLASALQLVMENVLSELKGRRQSGTLLSKEHQ
ALVVNRLISGVVDSSARSYKSLSSSSHLLEPVEMAVTLFGRKDVAEVQAFDSDTFAVPAA
EKDISYSLWVAGGIVASEELMEDFPFHLAKFVTPEKGSAPPHRLPHVEVEIYFSSELFQL
EKTIGLNGVHMLRLFIGKTMMKQHEPTPTSTTLLLAASGEKERDLYSIYDSTRDRGEVRI
PWIRKMVTKVSTVTGVVFSAEDSDENPSVDHMRASVSSVWRAWGHLVKDLHVHGDLDYLY
ISISRQQEWEGNKAYISELKKLEAARDADESAGPLVETANIARTLSRSSAAEFAAAGFAG
KARKLYLPISADFVVVECTLERKGLPHSMVVEDIVSILTEMQHEQMEMQRLSVLDAMATQ
VENEAKSGSCTSVARSRDKIVPVLYEPKVVVSHAGTLENGTHAFQRVRIRGSCRAHVEAL
AAALQDEAGSYFTDRSLPLSMTSATHTATGSSEDQNDQAGGWSLPKNLSFRAVRAPSSQQ
RLIGHSAPSASAVGNKLGDPTSRSRYSRSQTLTLAADSSALVTDDERQFWKENYYRLSEI
KGIYHDRVDATDALGHSWQSLPPRVHEHLALLNRRLAPGDGAAGSGTTATDQDQDDEGDI
PASGKRKRKRDGKKKAKQTTADKETAAAASLGLAPEKLFEYLCTDMEAESARHDLRAGDC
AGYDYLLNLRRIPDKHLPLVAPAVVSVTSKGFINYYGPQRFATYTRMNMHPGLHLLKGQY
KAAAHVLVQQFYLDAALEAERQRTGQAFPRLKGLQGYGGVRLPDFLRSGTPRSIAEHGTP
MHRVLYNALQASALLGGDDSLDGNDGLRGQGHGSSEPGWGALAAASGERRGKSQSRASGA
AHHVDRDSAAGAAHAGGSDDPCAEAFLRVIGPRVCAMLIQEFLSFVWNDIVNQRFQRYGT
FTLLPGDLVRAGGVMAATFHNGHEGDAAMDPPLVYASRGEIERGVFSVWDLALPLPGADI
RLPQNHTEDLYVVTLQRYGLPFDPESRQWRCFKPSPLARHGGEPRRARAAAEGGSPSGAP
LSPYYNLTSTFALMEEELGSRTPITDALPLYVERQGGRFGGNDNALQADVGLDAVDMRPD
LRAGSGNSLGLTISASYRHALVRPNADTMQWRLLKGVVGDPYQRWGLTTQAQVRPLDAVQ
LASTSFAADAQPAWIFPSLSGEVTSINGRGVPQLLNVESGVSLEKEEVEDGPDDDAAGRP
NLPQVTPTGAEASQRSSFTRGTSPLATPAARTAAGYLHQRCWNGTSQLLREPLSARNLLA
SSSETKQQLTRRRRAPPAPSWLPRHHGSVLQLRLRLPAGVYPGMLVRELLKMDVNTPDVV
DLDRATSSSSRTDRRAQSWQDLTADQRATYQKWIAKRRQQRRFLQQPRAISLALLHQQIF
RSSGIRQSLLPTLRSYDSVSK
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgctcgaaatggtcattgcggcgtcttattctgggtctcagcgttgaggacgca
cagagcaagtttgacacgccagagtctcgaagcattcttcgcgtagcgcacgagcgatat
aatcagggcatctaccacgagcttcaagtcgctcagcgacagcgcaatgggctggcccca
gagcgcaagtgccacatcagccgctttacgaaaccaagtgtgccaggatttcaagcctac
ctgaaaggcgccccagacgactatgtaatccgagaagtctgggatgacgatgaagatgtc
gtcattggtgaaagtggtacgttgaggacgaaaagcaaagttgctcttagtcacagtagc
gccatcagcaacgcaccaactgtgtcatcaaaaataaagcaagagcaagatgctttcaga
atgacaaaggcactgatcctgaaaacgctggcctccgctctacagctcgtcatggagaat
gtgctctcggagctcaagggccggcgtcaaagtgggacacttttgtcaaaggagcaccag
gcattagttgttaatcgactaatcagcggagtggtcgattccagcgcaagaagctacaag
agtctgtcttcctcatcacatctgcttgagccagttgagatggcggtgacgctgtttggt
cgcaaagacgtagccgaagtgcaagcattcgatagcgacaccttcgctgttccagcagct
gaaaaagacatttcctactccttatgggtggccggtggcattgttgcgagcgaggaactt
atggaggatttcccatttcacctcgccaagttcgtgacacctgagaaggggtcggccccg
ccgcatcggctgccacacgtggaggtggaaatctacttctcctctgagctatttcagctg
gagaagacaattgggctaaacggtgtccacatgctacgcttatttatcggcaaaaccatg
atgaagcagcacgaaccaaccccaacctccaccacgctacttctcgccgcatcgggagag
aaggagcgtgatctttacagcatttatgactccacgcgcgatcgtggcgaagtccgaatt
ccgtggattcgtaaaatggtgaccaaggtatcgacggtgactggcgtggtgtttagcgcg
gaggactcggatgagaatccctctgtcgatcacatgcgtgcctccgtcagctccgtctgg
cgagcgtggggccaccttgtgaaggatcttcatgtacatggtgacctcgactatctctac
atttccatcagtcgacagcaagagtgggaaggcaacaaagcgtacatctctgagctgaaa
aagctggaggctgccagggacgccgatgagtctgccgggccgctcgtagagaccgcaaac
atagctcgtactttgagccgaagcagtgccgcagaattcgcggcagcgggttttgcaggc
aaagcacgcaaactgtacctgcctatttcagccgatttcgttgttgtagaatgcacactg
gagcgcaaaggcctgccacatagcatggttgtcgaggacattgtgtccatcttgacggag
atgcagcacgagcagatggaaatgcaacggctatctgttctcgatgccatggcaactcag
gtggagaacgaggccaagtccggttcctgcacctctgtagcgcgaagtcgagacaagatt
gtaccggtattgtacgagccgaaagttgtcgtctcccatgctggaacgctggaaaacggc
acacacgcatttcaacgagtccgcattcgcggcagctgtcgagctcatgttgaggcgctt
gcagcagcgctgcaagatgaagctggcagctacttcaccgacagatctctgcccctctcc
atgacctctgcgactcacaccgcaacaggcagcagtgaggaccagaatgatcaggcaggc
ggctggtcgcttccaaaaaatctctcgtttcgcgccgtgcgtgcgccgagcagtcagcag
cgccttatcggccacagcgccccatccgcctctgctgtaggaaacaagctcggtgatcct
acatcgcgcagccgttattcgcgctcgcagacgctcacgcttgcagccgacagttcagcg
ctcgtcacggacgatgagcgccagttttggaaagagaactattaccgactctctgagata
aaaggcatttaccacgatcgtgtcgatgcaacagacgctctcggtcattcgtggcagtct
ttgcctccacgtgtccatgagcacctcgccttactgaaccgtcgactcgcgccaggcgat
ggcgcggctggcagcggcactaccgcgactgaccaggatcaggatgatgaaggtgacatc
cctgcgtcagggaagcggaagcggaaaagggatggcaagaagaaggcgaaacagacaacg
gccgacaaagagacagcagccgcagcctcactagggctggcgccggagaagctcttcgag
tacctctgcaccgacatggaggcggagagcgcgcggcatgacctgcgtgctggcgactgt
gcggggtacgactaccttctcaatctacggcgcattccagacaagcaccttcctctggtc
gcccctgctgtagtgtccgtcacatccaaggggttcatcaactactatgggccgcagcgc
tttgccacctacactcgcatgaatatgcaccccgggctccacttgctgaagggccagtac
aaggcagcggcgcacgttttagtacagcagttctatctcgatgccgcgctggaggcggag
cggcagcgcaccggacaggcgtttccccgcctcaagggtctgcaagggtatggtggggtt
cgcctgcccgattttctgcgctctgggacgccccgctccatcgctgaacatggaacacca
atgcatcgggtgctctacaacgcgttgcaggcatccgccttgctcgggggcgatgacagc
ctcgacggtaacgatggcctgcgtggtcagggccacggcagcagcgaacctggatggggg
gcattagcagccgcctctggagaacgccgtggaaagagccagtcgcgcgcatccggtgca
gcacaccatgtggatagggatagcgccgccggtgctgcccacgctggtggcagcgatgat
ccctgcgcagaggcgtttctgcgcgtaattgggccacgcgtgtgtgcgatgctcatccaa
gagtttctgagcttcgtctggaacgacattgtcaaccaacggttccaacgctacggcaca
ttcacgcttcttcccggagacctcgtgagggccggtggggtcatggccgcgaccttccac
aacggccacgaaggagatgcagcaatggacccgccactggtctatgcctcccgcggcgag
atcgagcgtggggtgttttcggtgtgggacttggctctaccgctacccggcgccgacatc
cgccttccgcagaaccatacggaggacttgtatgtggtgacattgcagcgatacgggctg
ccgtttgaccccgagtcgcgacagtggcgctgcttcaagccgtcgccgctcgcgcgtcac
ggaggggagccaaggagggcgagagcggcggcggaaggagggtcccccagcggcgcaccc
ctgtctccgtactacaatctcacctccacctttgcactgatggaggaggaactgggctcg
cgcacacccatcacggacgcactcccgttgtatgttgagcgtcaagggggacgctttgga
ggcaatgataacgccctgcaggcggatgttggactggatgcggtggacatgagacctgac
ttacgagctggtagcggcaattcactcggcctcaccatcagtgcatcgtatcgccatgcg
ctagtgcggccaaacgccgacacaatgcagtggcgactcctgaaaggggtggttggtgac
ccgtaccagcgatggggactgaccacccaagcacaggttcggccactcgacgcagtgcag
ctggcaagcacgagctttgccgccgatgcgcaaccggcttggatattcccgtcgttatct
ggcgaggtcacctcgataaacgggcgtggtgtgccgcagctgctaaatgtggagtcgggt
gtgtcgctagagaaagaggaagtggaagacgggcccgacgatgacgcggcgggccgaccg
aacctgcctcaagtgactccaacaggtgccgaagcctcgcagagaagcagcttcacgaga
ggtaccagccctttagcaacacctgcggccaggacggccgccggataccttcaccagcgg
tgctggaacggcacctcgcagctgctgcgagaaccgttgtccgccagaaacttgttggca
tctagctcagagacgaagcagcagctgacgcgccgccgtcgagctccaccggcaccgtca
tggctaccgcggcaccacggcagtgtgttgcaactacgactacgtcttccggccggtgtg
taccctggcatgcttgtgcgtgagctcctcaagatggacgtgaacacgccggatgttgtt
gacctcgacagagccacatcgtcgtcctcgcgcaccgaccgccgtgcacaatcatggcaa
gatcttactgcagatcagagggcaacctatcagaagtggatcgcgaagcgtcgtcagcag
cgacggttcttgcagcaaccacgcgccattagcctcgccttgctacaccagcagatcttt
cgtagcagcggcatccgacaaagcttacttccaacgctgcgcagctacgatagtgtgtca
aagtag
DBGET
integrated database retrieval system