KEGG   Leishmania panamensis: LPMP_211770
Entry
LPMP_211770       CDS       T06539                                 
Name
(RefSeq) RNA helicase, putative
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
lpan  Leishmania panamensis
Pathway
lpan03013  Nucleocytoplasmic transport
lpan03015  mRNA surveillance pathway
lpan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LPMP_211770
  09122 Translation
   03013 Nucleocytoplasmic transport
    LPMP_211770
   03015 mRNA surveillance pathway
    LPMP_211770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_211770
   03041 Spliceosome [BR:lpan03041]
    LPMP_211770
Enzymes [BR:lpan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LPMP_211770
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     LPMP_211770
Spliceosome [BR:lpan03041]
 Complex C
  Other components
   EJC/TREX
    LPMP_211770
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    LPMP_211770
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA CMS1 EH_Signature
Other DBs
NCBI-GeneID: 22574999
NCBI-ProteinID: XP_010698962
UniProt: A0A088RQW1
LinkDB
Position
21:complement(<625298..>626539)
AA seq 413 aa
MGVGMGTHSAVALGGFQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKS
GMGKTAVFVFALLEQVEKAPQGQKPYCQAVVLVHARELAYQIEQEFKRFSKYLSYATTGV
FFGGIPEDENVKQLKKEVPAIIVGTPGRMKALIQAKAFDTTRVKWFVVDEFDRCLEDVKM
RRDVQEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKDATEIYVDQRAKLTLHGLAQFYM
NVTEVEKTRRLAEILDAVEFNQAIIFTSSVERCEALSRQLQQMKFPSQAVHSRMSQEERL
RVYENCKANNTRIMVATDLFGRGVDFDRINLVVQYDMASEADSYLHRVGRAGRFGTKGLT
IAFITTDEKEIKRENRTYTDGNIMKEVQERFEMKVEELMDIKAQLNESQYMNK
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggcgttggaatgggcacccacagcgccgtcgccctcggtggcttccaggacttttgt
ctgaagagcgagctcgcgaacgccatccgtgagaacggcttcgagcacccgtcggaggtg
cagcaccaggcactgcccaaggcgatgctcggcgctgacattctcgcccaggccaagtcg
ggtatgggcaagacggctgtgttcgtctttgcgctgctggagcaggtggagaaggcgccg
cagggacagaagccgtattgccaggccgtcgtactggtgcacgcccgcgagctggcctac
cagatcgagcaggagttcaagcgcttcagcaagtacctctcgtatgctaccaccggcgtc
tttttcggcggcatcccggaggacgagaacgtgaagcagctgaagaaggaggtgccggcg
atcatcgttggtacgccgggtcgcatgaaggcactcatccaggccaaggcctttgacacg
acacgcgtgaagtggtttgtcgttgacgagtttgaccgctgcctagaagacgtgaagatg
cgccgtgacgtgcaggagatcttcatgaagctgcccaaggagaaacaagtgatgatgttc
tctgccacgatgacggatgagctgcgtgatgtggcgaagaagttcatgaaggacgcaaca
gagatctacgtggatcagcgtgcaaagctgaccctacacggcctggcacagttctacatg
aacgtcacggaggtggagaagacgcgccggctggcggagatcctcgatgccgtggagttc
aaccaggcaatcatcttcacatcctctgtggagcgctgcgaggcgctgagccgccagctg
cagcagatgaaattcccctctcaggccgtgcactcccgcatgagccaggaggaacgccta
cgcgtgtacgagaactgcaaggcgaacaacacccgcatcatggtggccaccgacctcttc
ggccgcggcgtcgactttgaccgcatcaacctcgttgtgcagtacgacatggcctccgag
gccgacagctaccttcaccgcgtcggccgcgctggtcgctttggtacgaaggggctgaca
atcgccttcatcacgacagacgaaaaggagatcaagcgcgagaaccgcacctacacggat
ggcaacatcatgaaggaggtccaggagcgctttgagatgaaggtcgaggagctgatggac
atcaaagcccagttgaatgagagccagtacatgaataagtaa

DBGET integrated database retrieval system