KEGG   Leishmania panamensis: LPMP_231710
Entry
LPMP_231710       CDS       T06539                                 
Name
(RefSeq) Csl4p-like protein
  KO
K07573  exosome complex component CSL4
Organism
lpan  Leishmania panamensis
Pathway
lpan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPMP_231710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_231710
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LPMP_231710
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     LPMP_231710
SSDB
Motif
Pfam: EXOSC1
Other DBs
NCBI-GeneID: 22575376
NCBI-ProteinID: XP_010699326
UniProt: A0A088RTP8
LinkDB
Position
23:688411..689256
AA seq 281 aa
MPVILHTGARVAPGDTIFTSPAAVTSSNDALEGGAAEEAEVVPREGCVVQYVERYVTPKA
LSLSAPSTVVERLIVATRHGIAQWDGPLVSVFPLTSSGRAEYAAARGTGTPPGSTVSSSR
HTVLGPRPGDTVHLRITRLNHLFAFGEVIAVNWRWCSHRSLSSAAAGGGGNNSGVFKGVL
RQEDIRPFKPSKDQLLPPPPSLSFGPGDIVLAEVISQSDVHQYQLSTISEGCGVVESFIT
TIEGRYGGQEKIKLEHIPGRRDAMMIRSTGEVVPRWCPLLP
NT seq 846 nt   +upstreamnt  +downstreamnt
atgccggtcattctacacaccggtgctcgtgtcgcacctggcgacaccatcttcacctcc
cctgcggccgtgacgtcctctaacgatgccctcgaaggaggcgccgcggaggaggcggag
gttgtgccgagagagggttgtgtggtgcagtacgtagagcgatacgtaacgccaaaagcg
ctatccttgtcggcgccgtcgacagtggtggagcgcttgatcgtagctacccgtcacggt
atcgcgcagtgggatggaccccttgtgtcggtctttccccttacttcgtccggcagggcg
gagtacgcggcagcgcgcggcacaggcaccccacccggctctacggtctcgtcttcgcgg
cataccgtgcttggaccgcggccgggtgacacagtgcatctccgcatcactcgactgaat
catctctttgcctttggcgaggtcattgcggtaaactggaggtggtgtagccatcgcagc
ctctcctccgcggcagccggcggcggcggcaacaacagcggcgtcttcaaaggcgtcctg
cgacaggaggatatccgaccgttcaagccctcgaaagaccagctgctgccccctccaccg
tcgctgtccttcgggccgggcgatattgtgctcgccgaggttatttcacagtccgacgta
caccaataccagctcagcaccattagcgagggctgcggcgtagtggagagctttataact
actatcgaggggcgatacggcggtcaagagaagatcaagcttgagcatatacccgggcgt
cgcgacgccatgatgattcggagcacaggagaagtggtgccgagatggtgtccgctgctg
ccataa

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