KEGG   Leishmania panamensis: LPMP_231830
Entry
LPMP_231830       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
lpan  Leishmania panamensis
Pathway
lpan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LPMP_231830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_231830
   03041 Spliceosome [BR:lpan03041]
    LPMP_231830
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     LPMP_231830
Spliceosome [BR:lpan03041]
 Complex B
  Other components
   Prp19-related factors
    LPMP_231830
 Complex C
    LPMP_231830
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C Suf HAT_PRP39_C HAT_Syf1_M NRDE-2 UTP6_C
Other DBs
NCBI-GeneID: 22575388
NCBI-ProteinID: XP_010699338
UniProt: A0A088SAH4
LinkDB
Position
23:728251..730635
AA seq 794 aa
MDSDPRVSALQWEVTKEASASPKTWAELARTTAAAAATNPVERVNAVTLVYERALRAFAS
SYKLWRAYIRYRQQETRRLCGPSEWFQAMREVYERALAELPTMPMLWVDYMEFVVASEVP
RVTMTRHILARALAALPATQHHHLWRVAKRWCAMPVVPSATVQAVWRLYLSFQRSLHARR
EYFQVLVQKGDFNAFLQECVHLGLPNKLDKGAVEQRDLLFGDVSFWETVQTALQSKGWRF
TGDIDPLRELVALGKQRCASPVELSMAFAIFLYGQGNMREGRQELQGLLDAAPEAQTLTS
LYHLAVEVEDQLVESFAVDPNLKHLDDATYKRVVQHLFGDGDPLSHLERLVHDFPLLLNQ
AQLRNSPHNAALWLKRVELVQEDVYAGRSTFDDLVALYRQAIQQCTAGMSRVDGAAAQLF
FSCAQAFIRGGKLDSATLVLSEGAWYVPFTSAALNVQLLGLLVEVQLMSSASPLSVRDAL
AERLTSGARSGGSKRGRNGLLQSNAALPHVVHHPHAWILWCDVCAAYDATNATAWQSLVE
TLSSSPAFSAEAACYVAHKAYVCRQESIAVMVLERAVAATRQQPTAQLFVLEQYLSFLYV
RDGGKVPLHQFREVFSLVQQATPVAIRTAPSAVIDLHVSCAYMEAAIGLYGTAVRMMQEI
SLVAVAALRGRDEYLRILQAILEHSITFTEQRKGYDAVRKYCGALVQRLQHALLLQRVAL
HWASIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
SMRFGKRESTKGSG
NT seq 2385 nt   +upstreamnt  +downstreamnt
atggacagtgacccacgagtgagcgccctacagtgggaggtgacaaaagaggcctcggcg
tcgcccaagacgtgggcagagctggcccgcaccactgctgcggccgcagcaactaatccg
gtggaaagagtgaacgctgtgacgctggtgtacgagcgcgccttacgtgcatttgcctct
tcctacaagctatggagggcctacatcaggtatcgccagcaggagacccgtaggctgtgt
gggccgagcgagtggttccaggctatgcgcgaggtttatgagcgggcgttggcagagctt
ccgacgatgccgatgctctgggtcgattacatggagtttgtcgttgcctctgaagtgccg
cgtgtgacaatgacgcggcacatactagctcgtgccttagcagcactgccagcgacgcaa
catcatcatctctggagggtcgcaaagcgctggtgcgctatgcccgtcgtgccaagtgct
acagtacaggccgtctggcgactttacctgtccttccagcgctcgctgcatgcaaggcgg
gaatactttcaggtcctcgtgcagaaaggcgacttcaatgcgttcttgcaggagtgtgta
cacctggggctgcccaacaagttggacaagggcgccgtcgagcagcgtgacttgctcttt
ggcgacgtgagcttttgggagacggtgcagacggcactgcagagtaagggctggcgcttc
acaggcgatattgacccgctgcgcgagctggtcgccctcggaaaacagcgctgcgcctcc
ccggtcgagctctcaatggcctttgccattttcctttacggtcagggaaacatgcgagag
ggacgacaggaacttcaggggcttctagacgcggcacctgaggcgcagacgctgacttcg
ctttaccaccttgccgtggaggtggaagaccaactcgtggagtctttcgcggtggacccc
aatctcaagcacctcgacgacgccacgtacaaaagggtggtgcagcatctctttggtgac
ggcgacccactcagccacctcgagcgacttgtgcacgattttccgctgctcctcaaccag
gcgcagctcaggaacagcccccacaatgcggcactgtggctgaagcgtgtggagctcgtg
caggaggacgtttacgcaggccgctccacctttgacgatcttgtcgcactatatcgacag
gctattcagcagtgcactgcggggatgtcgcgtgtggatggcgcggcggcgcagctgttc
ttttcctgtgcccaggctttcattcgtggcggcaagctggacagcgctacgttggtgctc
agtgaaggggcgtggtacgtaccttttaccagtgccgcgctcaacgtgcagcttcttggt
cttcttgtggaggttcagctcatgtcttccgcgtcacccttgtcagtgagggatgcgctg
gcggagagactgaccagcggtgctcgtagtggcggttcaaagcgcggccgaaacgggctt
ctgcagtcgaatgcagcactaccccatgtggtacaccacccacacgcatggatcctgtgg
tgcgacgtgtgcgctgcctacgacgcgaccaatgcgaccgcttggcagagccttgtcgag
acgctttccagctcgcctgccttctctgctgaagccgcctgctatgtagcacacaaggcc
tacgtgtgcagacaagagtccattgccgtcatggtgctagagagagccgttgctgccacg
cggcagcaacctaccgcgcagctgtttgtgctggagcagtacctctccttcctgtacgtc
cgtgacggcgggaaagtgccgctacatcagtttcgcgaggtgttcagcctcgtgcagcaa
gccaccccggtcgccatacgcactgcaccatcggccgtcatcgacttgcacgtcagctgc
gcttacatggaggcagcgatcggcctatacgggacagctgtccgcatgatgcaggagatt
tccttagtcgctgtcgcggcactacgagggcgtgatgagtacctccgtatcctgcaggcc
atacttgagcactcgatcaccttcacggagcagcgcaagggctacgatgcggtacgcaag
tactgcggagcgctcgttcagcgcctccagcacgcacttctgctgcagcgtgttgcgctt
cactgggcctcaatcgagaagcgctctggtaacaccgcacaggcgcatcttatccttgac
gcgtgcggggacagccaggacccgtccacggagcatggagaggtctactggaggctgtgg
gagtctctctgcacaagtgtggaggagtttgagaaggtggctcggcgtcgtcagcaggcc
tcaatgcgcttcggcaagcgcgaaagtacgaaggggtcagggtaa

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