Leishmania panamensis: LPMP_240730
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Entry
LPMP_240730 CDS
T06539
Name
(RefSeq) DNA repair and recombination protein RAD54, putative
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lpan
Leishmania panamensis
Pathway
lpan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPMP_240730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_240730
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
LPMP_240730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
22575482
NCBI-ProteinID:
XP_010699413
UniProt:
A0A088SAQ1
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All DBs
Position
24:266337..269717
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AA seq
1126 aa
AA seq
DB search
MRKSTAGSAVANGTFRPPTTSGEDKPAARKPSVHPLLPATSASAVPRFMTGWRTLSSGSC
KAPGSGDSRNTNDSAADLPGPTVALVTSTGVRREVMYPTVTPHSAGSTANNDLLAHRLAR
RSQIDYHQPESASKAVVARTLQAAAAAQGKTGDEAEDCEDQGSGAAKLIRVEAGAGGVKS
VPSAPEAADGNAASAAKGSHEAAAAAANDDAIPTDKVVSCYPASPYGKLYFQVETDGATR
HESVGIVIIDTELLGVMMYDRVGRQYGNRPDPGYPIKQEEVDNAKAGSTLKVGTKHVLLI
TALTEEAFRSGEFFLRSEHDLRVREDKAKAKADAAAAEEAKARKPEMSFGISLGNNSAFA
SILFRRRPKDGETGFVVPVAGRPKMGKNGIIMNELRPLHDPDREKAVVLFRADYKRDLHG
RRQVSVVVDPIIGDKLRPHQIIGVKFLFDCITGERMLGYHGAILADEMGLGKTIQTVATI
YTCLKQGKHGQPTARKCLVVTPSSLVKNWCNEFDKWLGEGTVKHFAISESTPKGDRIISR
FDGDGDVLVISYDQLRKYIDRLSGLRFVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRII
LSGTPIQNDLSEFHAMVNFVNPGILGNQDLFTRVFEEPVSLGRDPDCPDHLKSLGRDRAH
YLSMLTQRFILRRTQSINESYLPPKVDVTVFVRLGAKQEQAYQKLADIVESAECTPLVLI
SALRKLCNHMDLFHDAVHLSHQVGNGIGASAQQQQTGRRRGRSSAADEPQGIPFSVLPKG
FKPGSLSMDYGSKMHFVSLVLNELRENGEHDKLVIVSNFTQTLDIIAALCNSKRIAYFQL
DGSTPIKKRQQLVDYFNVPDSQEVVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQA
MGRVWRDGQKKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKS
LFKYKVDTLCDTHDLLGCTSCEAAEPLATSDRRSRGKQAEELKMQFRKVGQPKKKCGPRM
DELKAWRHISSVASFNLDSVTRAVARHAPSLLSFLFADERDNTKMPGPVVSTRVKVDRPA
FEDDEDTITCASQAAIQQQESEMEIEVIDDDDEEEAEFDFSEKESD
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagtcaacggcaggcagcgccgttgccaacggcacattccgcccgcccacaacg
agtggtgaggataagccggcggcgcgcaagcccagcgtgcatccacttctgcccgccacc
tcggcttccgccgtaccgcgcttcatgactggttggcgtaccctcagcagcggcagctgt
aaggcgcccggatcaggggattccagaaacaccaatgacagcgctgcggatctgcctggt
ccaactgtggccctcgtcacctccactggcgtacgacgcgaggtgatgtaccccaccgtg
accccgcacagtgctggcagtacggcaaacaatgacctcctggcgcaccgactggcacgg
cgcagccagatagactaccaccagccggagtccgcctccaaggcggtggtcgcgcggacc
cttcaggctgctgcagcagcgcagggaaagacaggcgatgaggccgaggactgtgaagac
cagggaagcggcgccgcaaaactgatcagggtggaggcaggcgctggcggtgtgaagtca
gtccccagtgcacctgaggctgccgatggtaacgcagcatcagcagccaaggggagtcat
gaggccgctgcggcggctgcgaatgacgacgctatcccaacagacaaggttgtgagctgc
taccccgccagcccctatggcaagctgtacttccaggtcgagacggacggtgcgacgcgg
catgagtctgtcggcattgtcatcattgatacggagttgctgggtgtcatgatgtacgac
cgtgtggggcggcagtacggcaaccggcccgaccctggttacccgatcaagcaggaggaa
gtcgacaacgccaaggccggcagcaccttgaaggtgggcacaaagcacgtgctgctcata
acggctctcacagaagaagcgttccgtagtggcgagttcttcttgcgctccgagcacgac
ctccgcgtgagggaggacaaggccaaggccaaggccgacgccgcggccgccgaggaggcg
aaggcgcggaagcccgagatgagctttggcatctcgctcggcaacaacagtgcctttgcc
tccatcctcttccgccgtcgccccaaggatggagaaacaggcttcgtcgtccctgtggcc
ggccgaccaaagatgggtaagaacggcatcatcatgaacgagctgcgcccgctgcacgac
ccggaccgcgagaaggcggtggtgctgttccgcgccgactacaagcgtgacctgcatggc
cgtcgacaagtctccgtcgtagtagacccgataattggcgacaagctgcggccacaccaa
atcatcggtgtgaagttcctcttcgactgcatcacaggtgagcgcatgctcggctaccac
ggcgccattctggccgatgagatgggcctggggaaaacgatacagacggtggccaccatc
tacacatgcttgaagcaaggcaagcacggccagccgacagcccgcaagtgcctcgtcgtg
acaccgtcctcgctggtaaagaactggtgcaatgagtttgacaagtggttgggcgagggg
accgtaaaacattttgccatctccgagtcgaccccgaagggcgaccgcatcatttcccgc
ttcgacggcgacggcgacgtcctcgtcatctcgtacgatcagctgcgcaaatacatcgac
cgtctctcgggactgcgctttgtcgagctggtcgtctgcgacgagggccaccgcctcaag
aacgcggaggtgaagacgaccaaggcagtggacatgctgccgacgcgcaatcgcatcatc
ctctccggtacccccatccagaacgatctatccgagtttcacgccatggtcaattttgtc
aaccccggtatcctcggcaatcaagacctcttcacacgcgtcttcgaggagcccgtctct
ctcggccgtgatccggactgcccagaccatctcaagtcgcttggccgcgatcgcgcgcat
tacctctcgatgctgacgcagcgctttatcctccgtcgcacgcagtccatcaatgagtcg
tacctgccgcccaaggtggacgtcacagtctttgtgcggctgggagcaaagcaggagcag
gcctaccagaagctggccgatattgtcgagtctgcggagtgcacaccgctggtgctcatt
tccgccctgcggaagctttgtaaccacatggatctcttccacgacgcggttcacctgtcc
catcaggttggcaatggcatcggtgcatcggcgcagcaacagcagactggacgccgccgc
ggccgcagcagcgcagcagatgagccacagggcatccccttctctgtgctgcccaagggg
ttcaagccgggtagcttgagtatggactacggcagtaagatgcactttgtctccctcgtg
ctcaatgagcttcgagaaaacggcgaacacgacaagctcgtgatcgtgtcgaacttcaca
caaacgctcgacatcattgcggcgctgtgcaactcgaagaggatcgcgtacttccagctt
gatggcagcacgcccatcaagaaacgtcagcagctggtggactacttcaacgtacccgac
tcacaggaagttgtatttctgctttcctcgaaggccggcggtgtcgggctgaacctgatc
ggcgccaaccggctgattctcttcgaccccgactggaatcccgcaaacgatgcgcaggct
atgggccgcgtctggcgcgatggccagaagaagcgggtcttcatctaccgcttgctcagc
accggcactatcgaggaaaaaatctaccagcggcaggtgagcaagcaaggcttgtcggcg
aacgtggtagacatgcaggaagactcaaaacagcacttcacactggaggagctcaagtcc
ctcttcaagtacaaagtcgacacgctatgcgacacccacgatctgctcggttgcacatcc
tgcgaggcagccgagcccttggccacgagcgaccgcaggagtcgcggcaagcaggcggag
gagctcaagatgcagttccgcaaggtggggcagccaaagaaaaagtgcggtccacgcatg
gacgagttaaaggcgtggcgccatatcagctctgtggcctctttcaaccttgacagcgtc
acccgcgccgtggcaaggcacgcgccgtcgctgctgtccttcctcttcgctgacgagcgt
gacaacaccaagatgcccggacccgtggtgtcgacccgcgtgaaggtcgacaggcccgcc
ttcgaagacgacgaggacacgatcacgtgcgccagccaggccgccatacagcagcaggag
agcgaaatggagattgaggtaatcgacgacgacgatgaggaagaggccgagtttgacttt
tccgagaaagagagtgactag
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