Leishmania panamensis: LPMP_241500
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Entry
LPMP_241500 CDS
T06539
Name
(RefSeq) ATP-dependent DEAD/H DNA helicase recQ, putative
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lpan
Leishmania panamensis
Pathway
lpan03440
Homologous recombination
lpan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPMP_241500
03460 Fanconi anemia pathway
LPMP_241500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpan03032
]
LPMP_241500
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_241500
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPMP_241500
DNA replication proteins [BR:
lpan03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
LPMP_241500
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
LPMP_241500
Bloom's syndrome complex (BTR)
LPMP_241500
FA (Fanconi anemia) pathway
LPMP_241500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Choline_kin_N
Motif
Other DBs
NCBI-GeneID:
22575559
NCBI-ProteinID:
XP_010699489
UniProt:
A0A088RRP6
LinkDB
All DBs
Position
24:560115..565376
Genome browser
AA seq
1753 aa
AA seq
DB search
MRLVAKQLREAQHHRDDLVLLEDEEHDPSDELQQLDVRIAELEQRFARFRVTQATLLNRP
LSTSTPPSLSSMPSSLVQLPHSPSVIGLGCANYSSAYGPGIGSSTGAMGYPGGSEQRDPL
MQSTIPLPWPAAPSSGTATPAGAAGAPPHGGWLTTMTEHSVNHSGIGDCSPALTGQWDTS
VNGGSPSFSSAEYSIPSARKGFSWEVYEQQMDPEALSRDALSRTAHVELPINPTHQYGGE
RFPWSTELRRMMREVFGLHDYRFCQLEIMNACMDGRDVFVLLPTGGGKSLCYQLPALMPN
PAQVTVVVSPLISLIQDQVYALIANDIPAMALTGQTNDAARRSLFQEWASGHVVHTLVYV
TPEYFGRSDHFVGTLQRLTDKGLLCRFVIDEAHCVSQWGHDFRPDYRKLSVLKRQFPRTP
ITALTATATDVVQQDVIKTLALRNAIIFKGSFNRANLKYSVQHVRGKQVVSVVEDLILHR
FSPSWCGIVYCLSRKDCEEMAAALVRRGIKASYYHSEAASKNERQERWTRDELQVICATI
AFGMGINKPDVRYVVHAAMPKSIEGYYQESGRAGRDGLPSECVLLSTTTDRQRQERLIHG
SKDWRASLTSLHRMLAYTLNDVDCRRRQQLHHFGEQVDVHFCLTQRAAAGGGAVPALPPT
SVASASAVTQLCDNCASKLAEGWTVKEVNVSNILLDLYAIVLRLGAMTSKQLIGVYRGSV
SDMGRAVEMRMRVKGTPAEYKGGAKQSKVLLERTLLEGMQLGLFEERLDSINDFAVCAFV
ELGGTPTAQQLHCDIKAEHRVVTVRLRGEKTRSDRGDAIFDAVSAAPETFSPGRIAAVAT
TAALAVEGGGKRRDAVVSAVSGAISKDDLPLFELFDGTRRQAAVGDGSGTRGLLAAQDAK
KRKPKPLKGRRGGGYVLDEADGSTDGDEGVISSIEEDSALSNSMASFINDESSSSSVATP
FNISSATTPQRDGAGAALADAGRRQRTLSTGGSQDGIISTLSEDTQAQAQVHQPPRKRTR
GDAVDQRAVLAQRGLRSAATAATPASTVPAARLERLKVLLQEEMDRLVQTLVSQAVGCRS
YNVMPKSTILRLTETLAIPGWGSVADLIDLEGMGKSKVKRYGADILRVYRHFRYLHIGDV
EELSEAESAEVKDMKTVVRPRNRLGRANASAGELIVDNDGEGGCSGDGDRLPSTATPGFV
GGMSIEAASTNALATYQPAQRPMLLDTATPEKARASISSSAGTPSRDGGSGVKLPGTVGD
QQRQRRTTFTFSSTTAAAPAAVPISVNVRPSSPWLSLQGPVGCEGAPPLPPQANAAAAAN
RIADIYDQLTCDPSVANAHDNTILTAASAVAAALPPHEPHPPPTPPMPQFSVPLFPEPPA
WQAPPSTVAVAAAGISWGPPAPPPPPPPHNNTAGGNGHLFSPSAPSTSASVLLAGSGLPM
GQRPRPQVPQQPFTMMAQTVYSHALASGDPSLADTLRSGSHAGASHATDNSELLIGSSPI
PTQQHQQRHAYFFNGQSVPQALSGGGVETGEGQRSSNGVVLLGSDELTQAPSIPLPSTAL
GLGDLSASSLTHGSRGAAAAATAGHVRDAPSPSRQPEAKDMHSVDYLMGLCNDARFRTPL
SGRLSDLVTCGAGGPSRSAIPSPALDTVYSSGAATANTGHAVSHPLPYHTARGKSLGSGS
TLLSPGAETPISSSEGPLFQSSTPGSVPQPQLQKLYQQRQSQPSKREDGAAVGGNNGADR
DRQEVYTIEDESE
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgtcgccaagcagcttcgtgaggcgcaacaccaccgcgatgacctcgtgctc
ctcgaggacgaagagcacgacccctcggacgagctgcaacagctggatgtgcgcattgca
gagctcgaacagcggttcgcccgtttccgcgtcacccaagcgacgctgctgaacaggccc
ctctccacctcgacgccgccctccctctcctccatgccgtcctcgctcgtgcagttaccg
cacagcccatcggtgattggtctcggctgtgcgaactacagcagcgcgtacggcccaggt
atcggcagcagcactggagctatgggctaccccggcggcagcgagcagcgagacccactg
atgcagagcactataccgttgccttggcccgctgcgccgtcaagcggcaccgctacacca
gcaggtgctgcgggtgcaccaccacatggtggctggctcaccaccatgaccgagcacagc
gtaaaccacagcggcatcggtgactgttccccggcgttgacgggtcagtgggacaccagc
gtcaacggtggctcgccgagcttcagcagtgccgagtactcgattccctcagctcgaaaa
ggcttctcgtgggaggtttacgagcagcagatggacccggaggcgctgtcgcgcgatgct
ctgtctcgcaccgcgcatgtcgagctccccatcaaccccacgcaccagtatggaggcgag
cgcttcccgtggtcgacggagcttcggcgcatgatgcgcgaggtgttcggcttgcacgac
taccgcttctgtcagctcgagatcatgaacgcgtgcatggacggccgcgatgtttttgtg
ctactgccgaccggtggcggcaagtctttgtgctaccaacttcctgcgctgatgcccaac
ccggcccaggtcaccgtagtcgtgtcgccgcttatctcgcttattcaagatcaggtgtac
gcgctgatcgcaaatgacatccccgccatggccctcaccgggcagaccaacgacgctgct
cgccgcagcctcttccaggaatgggcctccggccacgtcgtgcacacgctcgtgtacgtg
acgccggagtactttggtcgcagcgaccactttgttggcacgttgcagaggctcaccgac
aaggggttgctctgccgctttgtgattgacgaggcgcactgcgtgtcacagtggggccac
gacttccggccagattaccgtaagctctcagtgttgaagcggcagtttccacggacgccc
atcacggcactgaccgccacagcgacggatgtcgtgcagcaggatgtgatcaagactctt
gcccttcgcaacgccatcatcttcaagggctccttcaaccgagccaatctcaagtactcg
gtgcagcacgtgcgaggcaagcaggtggtctcggttgttgaggacctcatactgcaccga
ttctcgccgtcgtggtgcggcatcgtgtactgcctgtcgcgcaaggactgcgaggagatg
gcggcggcactcgtacgcaggggcatcaaggcctcctactaccactccgaggcggcgtcg
aagaacgagcggcaggagcgatggacacgtgatgagctgcaagtgatttgcgccacgatt
gcctttgggatgggcatcaacaagccagatgtccgctacgtcgtgcacgcggctatgcca
aagtccatcgaggggtactaccaggaaagcggccgcgccggacgtgatggtttgccgtcg
gagtgcgtgctgctgagcaccaccacggatcgccagcgccaggagaggctgatccacggc
tcgaaggactggcgcgcgtcgctcacatcgctgcatcgtatgctggcatacaccctcaac
gacgtcgactgtcgccggcgtcagcagctgcaccactttggtgagcaggttgacgtccat
ttctgccttacacagcgtgccgccgctggcggcggtgcggtgcccgcgctgccaccgacg
tcggtcgcatcagcgtctgccgtcacacagctgtgtgacaactgtgccagcaagctggca
gagggctggacagtgaaggaggtgaatgtgagcaacattctgcttgacctgtacgccatc
gtcctgcgcctcggcgcaatgacgtcgaagcagctgattggcgtttaccgcggctctgtc
tcggatatggggcgcgcggtggagatgcgcatgcgcgtgaagggaacgccggcggagtac
aagggcggcgccaagcagtccaaggtactcctagaacgcacgctgctggaggggatgcag
cttggactgttcgaggagcggctggacagcatcaatgacttcgccgtctgcgcctttgtg
gagcttggcggaaccccaacagcacagcagctccactgtgacatcaaggctgaacaccgg
gtcgtaacggtgcgtctgcgaggagagaagactcgcagcgacagaggagacgccatcttc
gacgcggtgtctgcagcgccggagactttttcccccggtaggattgctgcagttgctacc
actgccgcgctggccgtcgaaggcggcggcaagcggcgtgatgctgtggtcagtgctgtt
tctggcgccatctccaaggacgaccttcccctcttcgagctgtttgacggtacccgaaga
caggcagccgtgggcgatggtagcggcacacgaggtttattggctgcgcaagacgcgaag
aagcgcaagccgaaaccgctgaaggggcgccgtggcggtgggtacgtactggacgaggca
gacggcagcaccgatggcgacgaaggtgtgatctcatccatcgaggaagactctgcatta
tcgaacagcatggcgtccttcatcaacgacgaaagcagcagcagcagcgttgccacccca
ttcaacatctccagtgcgacgacgccgcagcgcgatggggccggggcagcattagccgat
gctggacgccggcagcgcacgctatcgacgggtgggtcgcaggacggcatcatctcgacg
ctgtcggaggacacacaagcccaggcgcaagtgcatcagccgccgcggaagcgcactcgc
ggtgacgcggtcgaccagcgagcggtcctggctcagagaggcttaaggagcgctgctaca
gccgcgactccggcgtcgactgttcctgcggcgcggctggagcgcctgaaggtgcttctg
caggaggagatggatcggctcgtgcagaccctcgtgagccaggcggtggggtgtcgcagc
tacaacgtgatgcccaagagcacgattctgcggctgaccgagacgctcgctattccaggc
tggggcagcgttgccgacctcattgacctggaggggatgggcaagagcaaggtgaagcgg
tacggggctgacattctgcgggtgtaccgtcatttccgctacctccacattggcgatgtc
gaggagttgtcagaagcggagtcagcggaggtgaaggacatgaagacggtggtgcggccg
cgcaatcgcctcggccgcgcaaacgcctccgctggtgagttgatcgttgataatgacggg
gagggggggtgcagtggtgatggcgaccgacttccaagcacagccacgcctggatttgta
ggtggaatgtccatcgaggcggcatcgacaaacgcccttgcaacctatcagccagcacag
cgcccgatgctgctggatacagccacacccgagaaggcgcgtgcatcgatctcttcgtcc
gccggaaccccatcgcgcgacggcggcagcggtgtgaagctgccaggaaccgtcggcgac
cagcagcgacagcggcgcaccacgtttactttttcgtcgacgacggctgccgctcccgcg
gcggtgcccatcagcgtcaacgttaggccatcctccccatggctatctctgcagggccca
gtggggtgcgaaggtgcaccgccacttccaccgcaagcaaatgccgctgccgcagcgaac
cgtattgcggatatttacgaccaactcacgtgtgacccatcggtcgccaatgcacatgac
aacacgattctcacggctgcctccgctgtagcagccgctctaccgccgcacgagccgcat
cctccccctactcctcccatgccgcagttctccgtgcctctctttccggagccgcctgcg
tggcaggcgccgccttccactgttgctgttgctgctgctggtatatcatggggccctcca
gcgccgccgccgccgcctccaccccacaacaacaccgccggtggaaacggccatctgttt
tctcccagcgcgccctctacatctgcctcggtgctcctggccggctcagggcttcccatg
ggccagcgaccgcgtccacaagtgcctcagcagccgttcacgatgatggcccagacggtg
tattctcatgccttggcgtccggtgaccctagcctggcagacacacttcgaagcggtagt
cacgctggcgcttcacacgccactgataacagcgaactgctgattgggagcagccctatt
cctacgcagcaacatcagcaacgccacgcgtacttcttcaacggtcaaagcgttcctcag
gctctcagtggaggcggggtagagactggtgaggggcagaggagtagtaacggcgtggtg
ctgctcggctccgacgagcttactcaggcgccctcgataccgctcccatcgacggcgctc
ggtctcggcgacctctccgccagcagccttactcacggcagtagaggagctgcagcggcg
gcgacggcgggtcacgtgcgcgacgcaccgtctccatcacggcagcctgaggcaaaggac
atgcacagcgtggattacttgatgggcctatgtaatgatgcgcggttccgcacgccgctg
agcgggcgactgtctgacttggtaacttgtggcgctggaggcccctcccgatccgcgatt
ccgtcaccagccctcgacaccgtttattccagtggtgcggcaacagcgaacaccggccat
gctgtgagccatccacttccctaccacacagcgagaggaaagtcgctcggcagtggctcg
acgttgctctcgcctggtgctgagacaccgatctcttcctccgaagggccattgtttcag
tccagtacaccagggtctgtcccacagccgcaactgcagaagctgtatcagcagcggcag
tcgcagccgtcgaaacgagaggatggcgcggcggtgggtggtaataatggcgctgaccgc
gacaggcaagaggtctacaccatcgaggacgagtcggagtag
DBGET
integrated database retrieval system
