KEGG   Leishmania panamensis: LPMP_250440
Entry
LPMP_250440       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
lpan  Leishmania panamensis
Pathway
lpan03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LPMP_250440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lpan03009]
    LPMP_250440
Ribosome biogenesis [BR:lpan03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    LPMP_250440
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Utp13 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR90_beta-prop_4th Beta-prop_WDR75_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_DCAF12 Utp12 Beta-prop_IFT122_2nd UTP15_C HCV_NS5a_1b Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 22575692
NCBI-ProteinID: XP_010699616
UniProt: A0A088RUG0
LinkDB
Position
25:complement(127222..130275)
AA seq 1017 aa
MEGKNCFRTRWTQEPIFSGGALASLALPVPSPATSSTLFRSGAVEECLVMACGDTVNVVR
TASGEVLCRYTLPVEDVILHIDAVTVHESAGDDNEDAAAAEDGFAQVKNNAGAANRSTTT
SESSRKKVRAGKTAKLEEEDARHVMQAEKRGAVASARAPSRGASTSHDERELAAPPGSYV
AVGTRSLQVYVLRVDSRVELPILPSLSLSAEHGAVAEAASEEGSAAEAEGAKGDVVRAET
ATEVLVQYSIKLERNWTAAQHAISVVHFSQSGVYLISGATDGTVKVWNVFHHHLTHNLVC
AHNSLVQSVCLDPSEAYLAVGSFEGHVTVFDFVAKRMVAEGRPHVQAVESMTFNDALTHV
YSIARDRRLALNKMMCSEGHKSTGLKEVRAIVVKEHVSSATFESAEMLHVGAMDGVVTTY
RVSESEAIQVVRRLPKAPAADAEDSAEEAFVRSLLVAGKPKGTGMRWLHGFVVHDTLPAS
ETSSLYVGDAGFNIQFLAPATAERSQYEVIRTIVGFLDQLLDVKLFPEASPLHRAVVTNS
KDVRLYASDGCVSSKTLRGHSDVVLCCAVSSNGAWIATGAKDKEVRVWSSEGCETILRGV
GGHAAEVTSLSFNGRQTDTYMLLFSVSSDENLRMWDVGVPLADRALAERPRSRVVEIKHR
SGVNAAHTGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKKIYREASLKGHRRGISSLAF
SPVDRVLASASNDGSVRLWSLVSLTCLKAMQVDRTSVLQLSFFNNGTQIVTGNAEGVLRV
WAIASSESVWSAEAHTEKIWALAVEERAALGETIFYSGAADGVLIATEDYTAEEVTRVKE
DRHNMIQQEQALANALRKGEFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCENALRGEL
LPALDAEQMTRLLQYTREWITNSRHCMVATLVLYTLISSRHFEAVAQVPSMSSLIEPLLA
HTRKHSQRQHDLLRRTYYIDYVIRGLVPNVLTSLPPFVHHDDSQKEKPPLAKRVRAE
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaggggaaaaactgcttccgcacgcgatggacgcaggagccgatcttcagtggcggc
gcgctggcctctttggcacttccagtgccaagccccgctacgtcgtcgacacttttcagg
tcgggcgctgtggaggagtgcctcgtgatggcgtgcggcgacaccgtgaacgttgtgcgt
acggcgagcggcgaggtgttgtgcaggtacacgttgcccgtagaggacgtgattcttcac
attgacgccgttacagtgcacgagtctgcgggcgacgacaacgaagacgccgctgccgca
gaggacggattcgcgcaggttaagaacaacgccggcgcagcgaacaggtcgaccacgaca
agtgagtcgtccaggaagaaggtgagggctgggaagacagccaagctggaggaggaggac
gcgaggcatgttatgcaagcggagaagaggggagcagtggcatccgcgagggcgccttcg
cgcggcgcttccacctctcacgacgagagggaactcgctgcgccacctggcagctacgtt
gcggttggcacgcgttctctgcaggtctacgtacttcgcgtcgactctcgagttgagttg
cccatcttgccctcgctctctctttcagcggaacacggcgctgttgccgaggccgcttcc
gaggagggcagcgctgcggaggcggagggtgcgaagggggatgtagtacgcgcagaaacc
gctacggaggtcctcgtgcagtactcgatcaagttggagcggaactggacggcagcgcag
cacgccatctcggtcgtgcacttctcccagagtggggtctaccttatctcaggtgccacg
gatggcactgtgaaggtgtggaacgtctttcaccatcacctcacccacaacttggtgtgt
gcccacaactcgctcgtgcagagcgtctgcctcgaccccagcgaggcctacctcgccgtc
ggctccttcgaggggcacgtcactgttttcgactttgtcgcgaagcggatggtagcggaa
gggcggccccacgtacaggcggtcgagtccatgaccttcaatgacgcgctcacacacgtc
tattccatcgccagagatcgccgtctcgctctcaacaagatgatgtgtagcgagggacac
aagtcgacggggctgaaggaggtgcgtgcgattgtggtgaaggagcacgtgtcgagcgcc
accttcgagagcgccgagatgcttcacgttggtgcgatggacggcgtggtcaccacctac
cgcgttagtgagagcgaggccatacaggttgtgcgtcggcttccaaaggcgccggccgcg
gatgccgaggacagcgccgaggaggcgtttgtgcgctctctcctggtggcgggcaagcca
aagggcacgggcatgcgctggttacatggctttgttgtgcacgacacgctgcccgcgtcg
gaaacctcctcgctgtatgttggtgacgcggggtttaacattcagttcctcgctcccgcc
acagcggagcgcagtcagtacgaggtcattcgcaccatcgttggcttcctggatcagttg
ctcgacgtgaagctgttccccgaggcctcaccgctgcaccgcgctgtagtgaccaatagc
aaggatgtgcgcctgtacgcctcggacgggtgcgtctcctcgaagacgctgcgcggccac
agcgacgtagtgctctgctgcgccgttagcagtaacggggcgtggatcgccaccggagcc
aaggacaaggaggtgcgcgtgtggtcgagcgagggatgtgagaccattttgcgcggcgtt
ggcgggcacgcagcggaggtgacgtcgctctccttcaatgggcggcagacggacacctac
atgctgctcttctcggtctccagcgacgagaatctgcgcatgtgggacgtcggtgttccc
ttggcggaccgtgcgctggcagagcggccacggtcacgagtggtggagataaagcacagg
agtggcgtgaatgcggcccacaccggccccatctacaccgtggctgttgcgcccaacgac
cagtacgtggcgacaggcggcaaggataaatcggtgaatgtgtggaacataacgggcaag
aaaatctaccgcgaggcctccttgaaggggcaccggcgcggcatctcgtccctcgccttc
tcgccggtcgatcgcgttctggcatcggcctcgaatgacgggtcggtgcgactgtggtcg
ctcgtgtcgctgacgtgcctgaaggcaatgcaggtagaccgcacgtcggtgctgcagctg
agcttcttcaacaacggaacgcagatcgtgacgggcaacgcagagggcgtgctgcgtgtg
tgggctatcgcgtcctcggagtcggtctggtcggcggaggcgcacacggagaagatatgg
gcattggcagtcgaggagcgcgccgcattgggcgagacgatcttctactccggcgccgcc
gacggcgttttgattgcgacggaggactacaccgccgaggaggtgacccgcgtcaaggag
gaccggcacaacatgatccaacaggagcaggcgcttgccaacgctcttcgcaagggggag
ttctcagaggcatttatgctggctctgcgactgagtcacccgcgccatctccgccaggtg
ctggtgcgttggtgtgccaaggacgcgcggcaatgcgagaacgcgcttcgtggggagctt
ctgcccgcccttgacgcggagcagatgactcggctgctgcagtacacgcgagaatggatc
acgaacagccgccactgcatggtcgctactctggtgctctacacactcatttcctcacgc
cactttgaggccgtcgcgcaggtgccgtcgatgtcgtcactgatcgagccgctgctcgcc
cacacgcgcaagcacagccaacgccagcacgacctgcttcgacggacgtactacattgac
tatgtcatccgcggtcttgtcccgaacgtgctgacgtcgctgcctccgttcgtgcatcac
gatgacagccaaaaggagaagccgccactcgccaagcgagtgcgcgccgagtga

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