KEGG   Leishmania panamensis: LPMP_251920
Entry
LPMP_251920       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
lpan  Leishmania panamensis
Pathway
lpan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPMP_251920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_251920
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LPMP_251920
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     LPMP_251920
SSDB
Motif
Pfam: Not3 NOT2_3_5_C
Other DBs
NCBI-GeneID: 22575840
NCBI-ProteinID: XP_010699762
UniProt: A0A088RT26
LinkDB
Position
25:complement(722471..724408)
AA seq 645 aa
MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKTFMQNDDYKEKTKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALERADSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQQKSEYQIRLENLQTHFFKWESLL
RMVNNEELDTDEVDDLQEPIQKVLEDDVELEVMEDMSIYDTFDIPEPKAKSVVPFDVSDY
EEKKVQSPKTTTKAKTPMSTVQAKPSPFITSLKEMVASPAAAKASSLTPVSPSILQPMSA
QASQQLSHVVSSLADNDNGEEEPVPEWMDDDMDTANDDTFGDEAMTGGGTIGSLAEMASV
TNKVVQDWEKPQKPIESPEPRTVKVSDTGHATLGERPKLTLPAAAPTPNAWERRAAEQQS
RQKAQQQQQQQQQQKNASNAALPVTPSWPSAAAAEASELEAVATPLVAPAATSPSTPASS
THTDPIQSFPPIPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAISY
FPQEVLPVLSSKDVYHHMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWYQR
LERPQTTTETEERGSYTFFDFEEKWDHDRIDDFLFEYKYLENELH
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgtcgaacatcaagaaggtgcaaacagaggcggaccgcctccttaagaaggtaaatgag
ggcctcgacgcgtacgacgagctgcacgagaagctagccaacgcgcccaacgcgagcgcc
aaggagcgcctcgagggagatctgaagcgggaactgaagaagctacagcggcaccgcgaa
gccatgaaaaccttcatgcagaacgacgactacaaggagaaaacgaagatgcaagtgtcg
cgcaagaagatcgaggagcgcatggagacgtttcgtgctatcgagcgggaaatgaagaca
aaggccttcagcaacgaaggattagcctctgccgcgctggagagggccgactcggccacg
gagcagtggctgaaagacgcgattgaggagggccgcaagaagatagagctgctcgagtac
gaggtgcagaaggcgaacaacggccgtgtacgacgtgggaagcagcagcagcagaagtcc
gagtaccaaatacgtctcgagaacctgcagactcatttcttcaagtgggagtcactgctg
cgcatggtgaacaacgaggagctcgacaccgatgaggtggatgacctgcaggagccaatt
cagaaggtgctcgaggatgacgtggagttggaggtaatggaggacatgtccatctacgac
accttcgacataccggagccaaaggcaaagtccgtagttcccttcgacgttagcgattac
gaggagaagaaggtacaatcaccgaagacgacgaccaaagctaagacgccaatgtccacg
gtgcaggccaagcccagcccgttcatcacctccctgaaggaaatggtggcgtcgccggcc
gcggccaaggcttcgtcccttaccccggtctccccgtcgatactgcaaccgatgtccgcg
caagcctcgcagcagctgtcccacgttgtaagcagtctagcagacaacgacaacggcgag
gaggagccagtgcctgagtggatggacgacgacatggacaccgccaacgacgacaccttt
ggcgatgaagccatgactggcgggggcacgatcggctctctcgctgaaatggcctcagtg
acgaacaaagtggtgcaggactgggaaaagccgcagaagcccatagagtcgccggaaccg
aggacggtgaaggtatccgacaccggccacgcaacactgggggagaggccaaagctgact
ctgcccgccgcggcgccgacaccgaacgcgtgggaacgacgtgccgccgagcagcaaagc
cgacaaaaggcacagcagcagcagcaacagcaacagcagcagaagaacgcctccaatgct
gccttaccggtgacgccatcctggccatccgctgcggctgccgaagcgagtgagctggag
gcagtggcgactccgctggttgccccagcggcaacttctccgtcgactccggccagcagc
actcacacagaccccatccagtccttcccgccgattcctggtgccgctcccggctccaag
ttcacacccaagaagatccacgaactcttggatatgtcgcttggcaacctgccgcacacg
cttgacgtgcagcgacagcgcccttatgagccgccgaacgcaattgacgcgatctcgtac
tttccccaggaggtgttgccggtgctgtcaagcaaggacgtctatcatcacatggacctc
gacacgcttttcttcatcttttactatcaccagaagtcgtatcagcagtactttgctgcc
aaggagctcaaggctcgctcctatcgctaccacacgaagcagcagcggtggtaccagcgg
ctagagaggccgcagacgacgacagagacggaggaacgcggctcatacaccttcttcgac
tttgaggagaagtgggaccacgaccgcatcgacgacttcctcttcgagtacaaatacctc
gagaatgagcttcactga

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