Leishmania panamensis: LPMP_251920
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Entry
LPMP_251920 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lpan
Leishmania panamensis
Pathway
lpan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPMP_251920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_251920
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LPMP_251920
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LPMP_251920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
22575840
NCBI-ProteinID:
XP_010699762
UniProt:
A0A088RT26
LinkDB
All DBs
Position
25:complement(722471..724408)
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AA seq
645 aa
AA seq
DB search
MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKTFMQNDDYKEKTKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALERADSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQQKSEYQIRLENLQTHFFKWESLL
RMVNNEELDTDEVDDLQEPIQKVLEDDVELEVMEDMSIYDTFDIPEPKAKSVVPFDVSDY
EEKKVQSPKTTTKAKTPMSTVQAKPSPFITSLKEMVASPAAAKASSLTPVSPSILQPMSA
QASQQLSHVVSSLADNDNGEEEPVPEWMDDDMDTANDDTFGDEAMTGGGTIGSLAEMASV
TNKVVQDWEKPQKPIESPEPRTVKVSDTGHATLGERPKLTLPAAAPTPNAWERRAAEQQS
RQKAQQQQQQQQQQKNASNAALPVTPSWPSAAAAEASELEAVATPLVAPAATSPSTPASS
THTDPIQSFPPIPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAISY
FPQEVLPVLSSKDVYHHMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWYQR
LERPQTTTETEERGSYTFFDFEEKWDHDRIDDFLFEYKYLENELH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatcaagaaggtgcaaacagaggcggaccgcctccttaagaaggtaaatgag
ggcctcgacgcgtacgacgagctgcacgagaagctagccaacgcgcccaacgcgagcgcc
aaggagcgcctcgagggagatctgaagcgggaactgaagaagctacagcggcaccgcgaa
gccatgaaaaccttcatgcagaacgacgactacaaggagaaaacgaagatgcaagtgtcg
cgcaagaagatcgaggagcgcatggagacgtttcgtgctatcgagcgggaaatgaagaca
aaggccttcagcaacgaaggattagcctctgccgcgctggagagggccgactcggccacg
gagcagtggctgaaagacgcgattgaggagggccgcaagaagatagagctgctcgagtac
gaggtgcagaaggcgaacaacggccgtgtacgacgtgggaagcagcagcagcagaagtcc
gagtaccaaatacgtctcgagaacctgcagactcatttcttcaagtgggagtcactgctg
cgcatggtgaacaacgaggagctcgacaccgatgaggtggatgacctgcaggagccaatt
cagaaggtgctcgaggatgacgtggagttggaggtaatggaggacatgtccatctacgac
accttcgacataccggagccaaaggcaaagtccgtagttcccttcgacgttagcgattac
gaggagaagaaggtacaatcaccgaagacgacgaccaaagctaagacgccaatgtccacg
gtgcaggccaagcccagcccgttcatcacctccctgaaggaaatggtggcgtcgccggcc
gcggccaaggcttcgtcccttaccccggtctccccgtcgatactgcaaccgatgtccgcg
caagcctcgcagcagctgtcccacgttgtaagcagtctagcagacaacgacaacggcgag
gaggagccagtgcctgagtggatggacgacgacatggacaccgccaacgacgacaccttt
ggcgatgaagccatgactggcgggggcacgatcggctctctcgctgaaatggcctcagtg
acgaacaaagtggtgcaggactgggaaaagccgcagaagcccatagagtcgccggaaccg
aggacggtgaaggtatccgacaccggccacgcaacactgggggagaggccaaagctgact
ctgcccgccgcggcgccgacaccgaacgcgtgggaacgacgtgccgccgagcagcaaagc
cgacaaaaggcacagcagcagcagcaacagcaacagcagcagaagaacgcctccaatgct
gccttaccggtgacgccatcctggccatccgctgcggctgccgaagcgagtgagctggag
gcagtggcgactccgctggttgccccagcggcaacttctccgtcgactccggccagcagc
actcacacagaccccatccagtccttcccgccgattcctggtgccgctcccggctccaag
ttcacacccaagaagatccacgaactcttggatatgtcgcttggcaacctgccgcacacg
cttgacgtgcagcgacagcgcccttatgagccgccgaacgcaattgacgcgatctcgtac
tttccccaggaggtgttgccggtgctgtcaagcaaggacgtctatcatcacatggacctc
gacacgcttttcttcatcttttactatcaccagaagtcgtatcagcagtactttgctgcc
aaggagctcaaggctcgctcctatcgctaccacacgaagcagcagcggtggtaccagcgg
ctagagaggccgcagacgacgacagagacggaggaacgcggctcatacaccttcttcgac
tttgaggagaagtgggaccacgaccgcatcgacgacttcctcttcgagtacaaatacctc
gagaatgagcttcactga
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