KEGG   Leishmania panamensis: LPMP_260020
Entry
LPMP_260020       CDS       T06539                                 
Name
(RefSeq) Lsm7p protein, putative
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
lpan  Leishmania panamensis
Pathway
lpan03018  RNA degradation
lpan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LPMP_260020
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPMP_260020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_260020
   03041 Spliceosome [BR:lpan03041]
    LPMP_260020
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LPMP_260020
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LPMP_260020
Spliceosome [BR:lpan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LPMP_260020
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 22575905
NCBI-ProteinID: XP_010699824
UniProt: A0A088RSL7
LinkDB
Position
26:complement(4655..4951)
AA seq 98 aa
MHRPARLMSAELAHILKKKEGILSLEKYLDRKVVVSQKGQEVHGVLKGFDNNVNLVLADA
ELWHGDTHIRTIGACVVRGGPVSIILSGDTTSIANPFA
NT seq 297 nt   +upstreamnt  +downstreamnt
atgcatcgtcctgcacggctcatgtctgcagagctcgcgcacattctcaaaaaaaaggag
ggcattttgtccttggaaaagtacctcgatcgtaaagtcgtggtttcccagaaaggtcag
gaggtgcacggcgtactaaaaggcttcgacaataatgtgaacttggtacttgctgatgca
gagttgtggcatggcgacacacacatccgcacgattggcgcctgtgtcgtgcgcggcggc
cccgtaagcatcatcctctctggggacacgactagcattgcaaacccctttgcctag

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