Leishmania panamensis: LPMP_260020
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Entry
LPMP_260020 CDS
T06539
Name
(RefSeq) Lsm7p protein, putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lpan
Leishmania panamensis
Pathway
lpan03018
RNA degradation
lpan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LPMP_260020
09123 Folding, sorting and degradation
03018 RNA degradation
LPMP_260020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_260020
03041 Spliceosome [BR:
lpan03041
]
LPMP_260020
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LPMP_260020
mRNA degradation factors
5'-3' decay
Lsm complex
LPMP_260020
Spliceosome [BR:
lpan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LPMP_260020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
22575905
NCBI-ProteinID:
XP_010699824
UniProt:
A0A088RSL7
LinkDB
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Position
26:complement(4655..4951)
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AA seq
98 aa
AA seq
DB search
MHRPARLMSAELAHILKKKEGILSLEKYLDRKVVVSQKGQEVHGVLKGFDNNVNLVLADA
ELWHGDTHIRTIGACVVRGGPVSIILSGDTTSIANPFA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtcctgcacggctcatgtctgcagagctcgcgcacattctcaaaaaaaaggag
ggcattttgtccttggaaaagtacctcgatcgtaaagtcgtggtttcccagaaaggtcag
gaggtgcacggcgtactaaaaggcttcgacaataatgtgaacttggtacttgctgatgca
gagttgtggcatggcgacacacacatccgcacgattggcgcctgtgtcgtgcgcggcggc
cccgtaagcatcatcctctctggggacacgactagcattgcaaacccctttgcctag
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