Leishmania panamensis: LPMP_270540
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Entry
LPMP_270540 CDS
T06539
Name
(RefSeq) replication factor C, subunit 4, putative
KO
K10755
replication factor C subunit 2/4
Organism
lpan
Leishmania panamensis
Pathway
lpan03030
DNA replication
lpan03410
Base excision repair
lpan03420
Nucleotide excision repair
lpan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPMP_270540
03410 Base excision repair
LPMP_270540
03420 Nucleotide excision repair
LPMP_270540
03430 Mismatch repair
LPMP_270540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpan03032
]
LPMP_270540
03036 Chromosome and associated proteins [BR:
lpan03036
]
LPMP_270540
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_270540
DNA replication proteins [BR:
lpan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LPMP_270540
DNA Replication Termination Factors
ELG1-RFC complex
LPMP_270540
Chromosome and associated proteins [BR:
lpan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LPMP_270540
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LPMP_270540
Check point factors
HRAD17(Rad24)-RFC complex
LPMP_270540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
AAA_16
Mg_chelatase
RuvB_N
AAA_assoc_2
RCF1-5-like_lid
AAA_19
AAA_24
AAA_11
RNA_helicase
nSTAND3
AAA_30
DNAX_ATPase_lid
AAA_5
DEAD
AAA_25
AAA_18
AAA_14
DUF434
Motif
Other DBs
NCBI-GeneID:
22576230
NCBI-ProteinID:
XP_010700143
UniProt:
A0A088SCK2
LinkDB
All DBs
Position
27:219924..221006
Genome browser
AA seq
360 aa
AA seq
DB search
MSIVSTPWVEKYRPQTVTDIVGNTEAISRLQVIAKEGNLPNLLLCGPPGTGKTTSMLCLA
RDLLLQSTDASSAGTSLGGSTKDILKDAVLELNASDDRGLDVVREKIKLFAQTKKTLPKK
FFSTGEGPTKDEHVVHLHKIVLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSKI
IEPIQSRCAVVRFKKLSDADILKRLVYVIQQESVSYTDDGLEALLYLAEGDLRQALNSLQ
ATHTGYGLVNADNVFKVCDQPHPVLVENIITACITKRSIDEAHKEMNRLLNRGYAPVDVI
ATFFKVVQANARLFRSELQQLEVLKIVGETTMRIAEGVGTSLQLAAMLARMITAVENTAS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtctatagtcagcacgccgtgggtagagaagtaccgtccgcagacggtgacagacatt
gtgggtaacaccgaggcgatttcgcgtttgcaggtgatcgcgaaggaaggtaacttgccg
aacttgcttctttgtggaccgcccggcaccggtaagacgacgagtatgctctgcctcgca
cgcgacctgctgcttcagagtaccgacgccagtagcgcagggacgtcattgggtgggtcc
acgaaagatattctcaaggacgcggtgctagagctgaacgccagcgacgatcgcggattg
gacgtggtgcgtgagaagatcaaactcttcgcccagactaagaagacgctgcccaagaag
tttttctctacaggcgaagggcccaccaaggatgagcatgtagtccacctgcacaagatt
gtgcttctggacgaagcggatagcatgaccccagctgcgcagcaggcattgcgtcgcaca
atggagctacacagcagcacaacgcggttcgcctttgcctgcaacaacagtagcaagatc
attgagcctatccaatcccgctgcgctgttgtccgctttaaaaagcttagtgacgcggac
atattgaagcggctagtgtacgtcatccaacaggaaagcgtctcctacaccgatgatgga
ctggaggcgctcctgtacctcgctgagggcgacctgcggcaggcgttaaattccctccag
gccacacacaccggctacgggctcgtgaatgctgacaatgtcttcaaggtgtgtgaccag
ccgcatccggtgctcgtcgagaacatcatcacggcgtgcatcacgaagcgcagcattgac
gaggctcacaaggagatgaatcgcctgcttaaccggggttatgccccggtagacgtgatt
gccacttttttcaaggtcgtgcaggcaaacgcgcgcctttttcgaagtgagctgcagcag
ctggaggtgctcaaaatagtgggcgaaacgacgatgcgcatcgccgagggtgtgggtacc
tcgctgcagctggccgcgatgcttgcacgcatgattaccgctgtggagaacactgcgtca
tag
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integrated database retrieval system
