Leishmania panamensis: LPMP_271040
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Entry
LPMP_271040 CDS
T06539
Name
(RefSeq) vesicular transport protein, putative
KO
K14571
ribosome biogenesis ATPase
Organism
lpan
Leishmania panamensis
Pathway
lpan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LPMP_271040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_271040
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
LPMP_271040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_33
AAA_22
AAA_14
RNA_helicase
AAA_2
AAA_28
TIP49
IstB_IS21
nSTAND3
ABC_tran
Mg_chelatase
NPHP3_N
TsaE
AAA_3
NACHT
AAA_17
AAA_11
Zeta_toxin
AAA_18
AAA_24
AAA_7
ATPase_2
Vps4_C
NB-ARC
Sigma54_activat
Parvo_NS1
NTPase_1
Rad17
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
22576282
NCBI-ProteinID:
XP_010700193
UniProt:
A0A088SCP8
LinkDB
All DBs
Position
27:complement(416818..418818)
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AA seq
666 aa
AA seq
DB search
MSDMSDHLKGKLKHMARQTPNGYRKQRPGSGPRHFADDNYPNHGKRPRDEEEGRQQDSKS
SSSRAPSGKGVGKNASDGGEGEVLGVIPKTTLEDMGGLAKELPVIKELIQLPIRMPHLFN
YLGADPPCGVLLHGPPGVGKTRLVHAIAGSLQVPLFFVSAPEIVSGISGDSEAKLRNLFM
DAIAASPSIVFIDEIDTIAGRREDAQRGMESRIVGQLLTCMDQVSQAWRQHRKVVCVMGA
TNRPEALDTALRRAGRFDREIALGIPSIDERQNILNIICSKINLSDDVDFFELANMTPGY
VGADLQLLVKEACVLAIRRKYKELDERGAVEGVKTEELSGFCVTFGELKEATKRVQPSAM
REGFTTIPNVSWDDVGALEDVREELVTSILQPIRAPKLHHRFGLDHPVGVLLYGPPGCGK
TLVAKAIANQSGANFISIKGPELLNKFVGESERSVRMVFARGRASAPCVLFFDELDALAP
RRGSDRANPSSERVVNQLLTELDGVEGRKDVYVIGATNRPDMIDPAMLRPGRLDKLLYVP
LPSAAQRGSILQTHARKYPVNAEVNLEKLALDERLAGFSGADLAALMREASLTALKGVYR
SHTKDELEGLERDITGKSADTAALPTITADNFEASLAKIKPSVSAADRANYESMSLELRN
SAKSVG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatgagtgaccacctcaaggggaagctgaagcacatggctcggcagactccc
aacgggtatcgcaagcagcgacccggtagcggcccacggcacttcgctgatgacaactac
cccaaccacgggaagcgtccgcgtgatgaagaggagggaaggcagcaggacagcaagtcc
agcagcagccgggctcccagtggcaagggggtaggaaagaatgccagcgacggcggagag
ggcgaggtgctcggtgtcatccccaaaaccaccctcgaagatatgggtggcttggccaag
gagctgccggtaataaaggagctcattcagctgcctatccgcatgccgcatctcttcaac
taccttggtgcagacccgccatgcggcgtcttgttgcacggtcccccaggcgttggcaag
acgaggctcgtccacgctatcgctggctcgctgcaggtgcccctcttctttgtctcggcg
ccagagattgtctccggcatcagcggcgacagcgaggcaaaactgaggaacttgttcatg
gacgccatagcagcgtcgccgagcattgttttcatcgacgagatcgataccattgcaggc
cgtcgcgaagatgcccagcgcggtatggagagccgcatcgttggacagctgcttacgtgc
atggatcaggtgtcgcaggcgtggcggcagcacaggaaggtggtgtgcgtgatgggggcg
actaaccgccctgaagcactcgacacggcgctgcgccgcgctggccggtttgatcgcgaa
atcgccctcggcatcccctcgatcgacgagcggcagaacatcctcaatatcatctgctca
aagattaatttgtcggacgacgtcgatttcttcgagctcgccaacatgacccccggctac
gtcggcgcagacttgcagcttctcgtcaaggaggcgtgcgtcctcgctatccgccgcaag
tacaaggagctggacgagcgcggtgctgtggagggtgtaaagacggaggagctctccggg
ttctgcgttacgtttggtgagctgaaggaggcaacgaagcgggtgcagccgtcggcgatg
cgggagggcttcacgaccatcccgaacgtttcctgggatgacgtcggcgccctcgaagac
gtgcgagaggagctggtgaccagtatattgcagcctatccgggcgccgaagctgcaccat
cgcttcggtctcgatcaccctgtcggtgtgctgctctacggcccaccaggctgcggcaag
acactggtcgcaaaggcaatcgcgaaccaatctggagcaaacttcatctcgatcaagggg
ccagagctgctcaacaagttcgttggggagagtgagcgcagcgtacgcatggtcttcgcg
cgtgggcgggcaagcgctccgtgtgttctctttttcgatgagttggatgccctggcaccg
cgccgtgggtcggacagggcaaacccgagcagcgagcgcgtggtaaaccaactcctgaca
gagctggacggcgtggaagggcgaaaggatgtctacgtgattggagccacgaaccgcccc
gatatgattgaccctgccatgctgcgtccaggtcgcctggacaagctgttatacgtgccg
ttgccgtcggctgcgcagcgcggatcgattctgcagacccacgcccgcaagtatccagtg
aatgctgaggtgaacctggaaaagctggcgcttgacgagcggctcgccggcttcagcggt
gccgacttggcagccctaatgcgtgaggcatcgctgaccgcgctaaaaggcgtgtacagg
tcgcacacgaaagacgagctggaggggctggagcgcgacatcaccggcaagagcgccgac
acggcggctttgcctaccatcacggcagacaacttcgaggctagcttggcaaagatcaaa
ccatcggtctctgcggcggatcgggcaaattatgagagcatgagccttgagttacgcaac
agcgccaagagtgtcgggtaa
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integrated database retrieval system
