Leishmania panamensis: LPMP_271690
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Entry
LPMP_271690 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
lpan
Leishmania panamensis
Pathway
lpan03008
Ribosome biogenesis in eukaryotes
lpan03013
Nucleocytoplasmic transport
lpan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LPMP_271690
03015 mRNA surveillance pathway
LPMP_271690
03008 Ribosome biogenesis in eukaryotes
LPMP_271690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_271690
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_271690
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LPMP_271690
mRNA cycle factors
Stress granule specific factors
LPMP_271690
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
LPMP_271690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
zf-CCCH_2
zf-CCCH
zf_CCCH_4
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
22576347
NCBI-ProteinID:
XP_010700255
UniProt:
A0A088RU46
LinkDB
All DBs
Position
27:671890..673740
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AA seq
616 aa
AA seq
DB search
MSRPYKKSKGAGGITKYNTPCKFFLRGSCSNQRCPYLHVRNQTVIRSTSHKEVAAQEGNG
TVKVMSTMLKLFFEKQTQLIYNAETGMLNLSQLASYDDLSSVASSINFNTRTFCVALCTC
IRELVSPPPAVLQLDRNELKGFHHLGKALEEAGLHASLRALSLAHNNITSTTIAQELKHF
SNLTELSLVGNPVRESVDYKLNFKKCVPWLQGLDGESMAAPPLELPWPRFFDPKHTLTDE
GSAAQGFFSSVRGYDSIQKALLHFIQSAVLNPLEMEPAPGLLTGVDAVSDVYALNATFTF
SLVSTEAAVSTPSRTAGGSAASTQRDVVREIVGFRMRQTESNHNVLLGLKSTTVAVGRTS
VCAKLEHVLYPKNFVVGHYIHESPDVAVLDNKGFGPNAIVGMKQPLSVITLHGVMLWRYR
TTGSDADVQHASLLRDALVIKRNFTRVITVSSTEPGRWHIVNDMVTLFPFRGGSGNEGEL
GASNPASGGAGVSTAPLTPESILFRDVHPYDVVFSPATDPKRAALIARRYRVPAPIVTTL
CSVVHSDRELAVILVDLTDIPLEVYEQCAPVVEMDPLASIFLCRIGNRFSIEPAEGVVLL
QKCGLDWPAIEQAVSR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggccgtacaagaagagcaaaggggctggggggataaccaagtacaacacgcca
tgcaagttcttcctgcgcggcagttgctctaatcagcgctgcccctacctacacgtccgc
aaccagacggtgatacggtccaccagccataaggaggttgctgctcaggaaggaaatggc
actgtgaaggttatgtcgacgatgctgaagctgtttttcgagaagcaaacgcagctcatc
tacaacgcggaaactggaatgctgaatctgtcgcaactcgcatcctacgacgacctgtcc
tctgtcgcctccagcatcaactttaacacgcgcaccttttgcgtagcgttgtgcacgtgc
attcgcgagctggtctcgccgccgccggccgttctgcagctcgaccgcaatgagctgaaa
ggcttccaccacctcggaaaagccctcgaggaggcgggtcttcatgcgtctctgcgtgcc
ctgtcgctggcgcacaacaatatcacgtccacgaccattgcacaggagctgaagcacttt
tcgaacctgacagagctgagcctcgtcggcaaccctgtcagggagagcgtcgactacaag
ctaaatttcaagaagtgtgtgccgtggctccagggtcttgacggggaaagtatggcggcc
ccgccgctggagctgccgtggccgcgattctttgaccccaaacacacgctgacggatgag
ggcagcgccgctcaaggcttcttctccagcgtacggggctacgacagcatacagaaggca
ttgctgcacttcatccagtcggcagtgctgaacccgctcgagatggagccggcccctggt
ctgttaaccggcgtggatgccgtatcagacgtctacgcgctcaacgcgacgtttaccttt
agcctggtatccactgaggccgccgtctcgacgccgagtcgaacggctggtggcagtgct
gcctcaacgcagcgcgatgtggtgcgtgagattgtgggcttccgcatgcgtcagacggag
agcaaccacaacgtgctcctcggcctcaagtcaacgacggtggcagttggtcgaacgagc
gtgtgcgccaagctcgagcacgtgctgtatccgaagaacttcgttgtgggccactacatc
catgaaagtccggatgtggcggtgctggacaacaaagggttcggccccaacgccattgtg
ggaatgaagcagccgctctctgtcattaccctgcatggcgtgatgctttggcgctaccgc
accaccgggtctgacgccgatgtgcagcacgctagtctcttacgcgatgccctcgtcata
aagcgcaacttcacacgcgtgatcacggtgtcgtcgacggagccgggccgctggcacatc
gtgaatgacatggtcactctcttccccttccgcggcggcagcggcaatgaaggcgagttg
ggagcctcgaaccctgcgagcggcggcgcaggtgtgagcaccgcccccttgacaccagag
agcattctcttccgtgacgtccatccgtacgacgtcgtctttagccctgccacggatccg
aagcgggcggcgcttattgcgcggcggtaccgcgtacctgcccccatcgtaaccactttg
tgttcagtcgtacactcagacagagaattggctgtcatcttggtggacttgactgacatt
ccgttggaggtgtacgagcagtgcgccccggttgtcgagatggatccgctcgcgagcatt
tttctttgccgtatcggcaaccgcttcagcattgagccggctgagggggttgtgctgctg
caaaagtgcggacttgactggcctgccattgagcaggcagtcagccggtga
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