Leishmania panamensis: LPMP_272390
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Entry
LPMP_272390 CDS
T06539
Name
(RefSeq) TPR-repeat protein, putative
KO
K23002
RNA polymerase II-associated protein 3
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpan03021
]
LPMP_272390
Transcription machinery [BR:
lpan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
LPMP_272390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_2
TPR_1
TPR_8
TPR_11
TPR_17
TPR_9
TPR_BSK1_C
TPR_19
TPR_16
TPR_14
MRP-L28
TPR_6
Motif
Other DBs
NCBI-GeneID:
22576417
NCBI-ProteinID:
XP_010700325
UniProt:
A0A088RUC8
LinkDB
All DBs
Position
27:<982309..>983772
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AA seq
487 aa
AA seq
DB search
MDRSVAEAIRQQSEDLRDELKELEQWEDAMQAREVARTQRKVPLSANAAVAEPPIRGTVP
SLKGAIQQQQARAASAGGDTAARAVVDPIQQAKDKGNALFQSGYLSEAVAAYTVGIDLDP
ASATTHVLYANRAMCYLKLGQWTAAEKDATTCVHMNTRYVKAYYRRAVARKQLGKLHEAR
ADLEAVLALAPKDVSAQQEMESVTRALQATRAAASQASATAGTSAKKRIIIEEVDSEDDE
AAGEAPVTSVSKLSAEEEGLRQACIEEDLRRLAAARESREVQARQEAQREAAAQAQRQRR
HERVEIIEEEEKSSTEEKKTASSPAAATPAVKQTPSSVTSSPPASSSPSPTSATTRARPR
PSIAKESLTAPKSFSEFERRFREVGQQPELRDYYVRQLNPATMANLFGSNMTPEMLLGIL
QAVKTFHSTVALQYARGLCQVRRVEDLTLFLNAQEKAVVQDVLDLLRSAPDIPAKDIEHI
ERKLKPL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcagcgtggcggaggccatccggcagcagtccgaggacctgcgggatgagctc
aaggagctggagcagtgggaggacgccatgcaagcgagggaggtggctaggacacagcgc
aaggtgcctctgtcagccaatgcggccgtagccgaaccacccattcgaggaacggtgccg
tcactgaagggggcgatacagcagcagcaggcgcgggcagccagcgctggtggcgacacc
gctgctcgagctgtggtggacccgatccagcaagccaaggacaagggtaacgcgctcttc
cagagcggctatctgtcggaggcggtggcggcctacactgtgggcatcgacctcgaccca
gctagcgctacaacgcacgtcctgtacgcgaaccgggcgatgtgctacctcaagctcggt
cagtggacggctgcggaaaaggacgcgacgacgtgtgtgcacatgaacactaggtatgtc
aaggcgtactaccggcgtgctgtggcacgcaagcagctcggcaagctgcacgaggcgcgc
gcagatcttgaggcagtgcttgccctcgcccccaaggacgtcagtgctcagcaggagatg
gagagcgtgacgagggcactgcaggcaacgcgggccgcagcgtcacaggcctccgccaca
gccggcactagtgcgaagaagcgcatcattatcgaggaggttgacagcgaagatgatgaa
gcagcgggcgaggcaccagtgacatcggtttccaagttatcagcggaggaggagggccta
cgccaggcttgcatcgaggaggacctgcgcaggctggcggcagcgcgcgagtcgcgcgag
gtgcaggcgcggcaggaggcacagcgcgaggcagcagcgcaggcccagcggcagcgccgc
catgagcgcgtcgagataatcgaggaggaggagaagtcctccacggaggaaaagaagacg
gcgtcctcacctgccgcagccacccccgcagtgaagcagacgccatcgtcagtgacgtca
tctccgccggcctcctcgtcgccctcacccacatccgccaccacacgcgcccgcccacgc
ccttccatcgccaaggagagccttaccgcgcccaagtcctttagcgaattcgagcgccgc
tttcgcgaggtaggccagcagccggagctgcgcgactactacgtgcggcagctcaacccc
gccaccatggcgaacctttttggcagcaatatgacgcccgagatgcttctcggcatcctg
caagccgtcaagaccttccactccacagttgccctgcagtacgccagagggctgtgccag
gtgcgtcgcgtcgaggacctgacgttgtttttgaatgcgcaggagaaggcagtcgtgcaa
gatgtactggacctccttcgctcagcccctgacataccagccaaggacatcgaacacatt
gaacgcaaactgaagcccttgtag
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