KEGG   Leishmania panamensis: LPMP_272510
Entry
LPMP_272510       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
lpan  Leishmania panamensis
Pathway
lpan03040  Spliceosome
lpan04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LPMP_272510
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    LPMP_272510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lpan03041]
    LPMP_272510
   04121 Ubiquitin system [BR:lpan04121]
    LPMP_272510
   03400 DNA repair and recombination proteins [BR:lpan03400]
    LPMP_272510
Enzymes [BR:lpan01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     LPMP_272510
Spliceosome [BR:lpan03041]
 Complex B
  Other components
   Prp19 complex
    LPMP_272510
 Complex C
   Prp19-CDC5 complex
    LPMP_272510
Ubiquitin system [BR:lpan04121]
 Ubiquitin ligases (E3)
  U-box type E3
   LPMP_272510
DNA repair and recombination proteins [BR:lpan03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    LPMP_272510
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WDR55 Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st U-box zf-Nse PALB2_WD40 Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 22576429
NCBI-ProteinID: XP_010700337
UniProt: A0A088RUR8
LinkDB
Position
27:1008915..1010465
AA seq 516 aa
MMLRCNISHQVPTHPVVSVRSGLVFEHSLVEKYVDEHGRCPITGDPLCKEDLIAAHGAAP
DVSIAASGNLGAASVPTLLERLQVEWEGVALEQFSLRQQVTQLQLELAHALQQYDAACRV
IARLSKELDSHRGGKAMAAEEADQGAAAVMVPAAVLRCVDATEAAERQGRKQRKASAAAS
SAAALPLQLTEEAQWVAASSPSASASSARSALRVAAAADDSSSAVFVSALTGDHAIVRYS
PNGISEEARGVGHTAAVHTLASQLGGVLLSAAEDQTVRVWSTKGAGLTVMHTLRYASGVA
AMSQRTVGGAYVLCGAADGVLTLSDLESGAHVVVTAPLTRDAASPTLTCVELHPYSSLAA
VAFQRTELQLWDTREMRADTSISHVRGAAAHTHICSATFGADCVSLAAGLTDGSVCVWDL
RQVLAPVAVLPPSPDTVPATVRYAPDGRSLVVGGHGVALYDCSLLSASSTSVEAIATAGL
KAGAVSDVCWTTSGADVLCGTVDGVVRLYSTAASTA
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgatgctgcgctgcaacatctcccaccaagtgccgacgcacccggtggtgtccgtcagg
tcggggctcgtctttgagcacagcctcgtcgagaagtacgttgacgagcatggccgctgc
cccatcacgggggatccgctgtgcaaggaagacctcattgccgctcacggcgctgctcca
gatgtgtccattgcggccagtggcaacctcggggctgcctccgtccctacgctcctggag
cgtctccaggtggagtgggagggggttgcgttggagcagttcagccttcggcagcaggta
acgcagcttcagctggagctggcacacgcgctgcagcagtacgacgccgcctgcagggtg
attgcgcgactcagcaaggagcttgattcccaccgtggaggcaaagccatggctgccgag
gaggctgaccagggcgctgctgcggtgatggtgccggcggcggtgcttcgatgcgtggac
gctaccgaagcggcagaacgtcaggggcgtaagcagcgcaaggcatcggcagcagcgagc
tcggcggcagccctaccgttgcagctaacggaggaggcgcagtgggtggccgcgtcgtcg
ccatcggcgtccgcatcctctgcgcgctcggccctgcgcgttgcggcggcggcagacgac
agcagctcggcggtcttcgtcagcgccctcacgggcgatcacgcgattgtgcggtacagt
cctaacggcatcagcgaggaggcgcgtggagtgggtcacactgccgccgtgcacacgctg
gcgagtcagctgggcggtgtcctgctctccgccgcggaggatcagacggttcgcgtgtgg
tcgacgaagggtgctgggctgacggtcatgcacacgctgcggtacgcgagcggggtggct
gcgatgagccagcggacggtgggcggagcctacgtgctctgcggtgccgctgatggtgtc
cttaccctctccgacctggagagcggtgcgcacgtcgtggtgacggcaccgctgacgcgc
gacgcagcgtcgccgacgctgacgtgtgtggagctgcacccgtacagctctcttgcggcc
gtggctttccaacggactgagctgcagctctgggatacacgcgagatgcgtgccgacacc
tccatctctcatgtgcgaggcgctgctgcgcacacgcacatctgcagcgccacatttggc
gccgactgtgtgtccctcgcggctggccttacggatggctcggtgtgcgtgtgggacctt
cgccaggtgttggcccccgtagcggtgctgccgcccagccccgacaccgtcccagccacg
gtgcgctacgccccagacggacgctctctcgtagttggcggacacggcgtggcgttgtac
gactgctcactcctgtcggcctcgtccacttcggtggaggccattgcgacggcaggactt
aaggcgggcgccgtgagtgacgtgtgctggacgacgagcggcgccgacgtactgtgcggc
actgtggacggcgtcgtccgcctgtactccaccgcagccagcacagcgtag

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