Leishmania panamensis: LPMP_281640
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Entry
LPMP_281640 CDS
T06539
Name
(RefSeq) ATP-dependent RNA helicase FAL1, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lpan
Leishmania panamensis
Pathway
lpan03013
Nucleocytoplasmic transport
lpan03015
mRNA surveillance pathway
lpan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LPMP_281640
09122 Translation
03013 Nucleocytoplasmic transport
LPMP_281640
03015 mRNA surveillance pathway
LPMP_281640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_281640
03041 Spliceosome [BR:
lpan03041
]
LPMP_281640
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_281640
03012 Translation factors [BR:
lpan03012
]
LPMP_281640
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPMP_281640
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LPMP_281640
mRNA cycle factors
Stress granule specific factors
LPMP_281640
Spliceosome [BR:
lpan03041
]
Complex C
Other components
EJC/TREX
LPMP_281640
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
90S particles
Helicases
LPMP_281640
Translation factors [BR:
lpan03012
]
Eukaryotic type
Initiation factors
eIF-4
LPMP_281640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
TelK_muzzle
Motif
Other DBs
NCBI-GeneID:
22576609
NCBI-ProteinID:
XP_010700504
UniProt:
A0A088RUH5
LinkDB
All DBs
Position
28:570362..571531
Genome browser
AA seq
389 aa
AA seq
DB search
METEQVDNIQANVLAIPTFEAMGLKEDLLKGMYRFGYKQPTAIQKRFIMPFLKGRDVIAQ
ASSGTGKTSAFCICLLQACDPHTREPQALILSPTRELAVQTQDLCNNIGHHMGLKAYACI
GGKSTEEDIRRLENGVHIVSGTPGRVFDMIRRKSLRVNGLKTLVLDEADEMLGKGFKAQI
HDIYRMIPPLQIILVSATLPADVLEMTEKFMTEPASILVKRDEITVDSVRQYFVSVDEEK
NKFDVLMELYDSLTIAHAVVFCNTRKKVEQLAKKMTREKFTVVAMHGDMPQAERDEIMRQ
FRDGHSRVLITTDLWARGIDVERVSLVLNYDLPLAREQYIHRIGRTGRMGRTGLAITFVR
HDELRLLRDIEQFYATQIEELPANIGDQM
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagcaagtagataatattcaggccaacgtgctcgccatccccaccttcgag
gcgatggggttgaaggaggacctgctgaagggcatgtaccgcttcggctacaagcagccc
accgccattcagaagcgcttcattatgcctttcttgaagggacgcgacgtcatcgcacaa
gcgtcctctggcacaggcaaaacgtctgccttctgtatctgccttctgcaggcgtgcgac
ccgcacacgcgtgagccgcaggccctcatcctctcgccgactcgcgagctggctgtgcag
acgcaggatctgtgcaacaacattggccaccacatggggctgaaggcgtacgcgtgtatt
ggtggcaaaagcacggaggaggacatccgccgcctggagaatggtgtgcacatagtctcc
ggtactcctggtcgtgtcttcgatatgatccgccgcaagagccttcgtgtgaacgggctg
aagacccttgtgctagacgaggcggatgagatgctgggtaagggattcaaggctcagatt
cacgacatttaccgtatgataccgccgctgcagatcatcctcgtgtcggcgacactgccg
gctgacgtgctggagatgacggagaaattcatgacagagcccgcgagcattctcgtcaag
cgcgatgagatcactgtggatagtgttcggcagtactttgtctccgtcgacgaggaaaaa
aacaagttcgatgtcttgatggagttgtacgacagtctcacaatcgcccacgcggtagtg
ttttgcaacacccgtaaaaaggtagagcaactcgcgaagaagatgacgcgcgagaagttc
actgtggtcgccatgcatggcgacatgccccaggccgagcgtgacgagattatgcggcag
ttccgcgatggtcacagtcgcgtgctcatcacaactgatctctgggcgcgtggcattgat
gtggagcgcgtctcgcttgtcctcaactacgatttgccgctcgcgcgtgagcagtacatt
catcgcattggccgcactggtcgcatgggccgcactgggcttgccatcacattcgtgcgc
catgacgagctgcgcttgttgcgcgatatcgagcagttctacgcgacgcagattgaggaa
ctccccgcgaacatcggagaccaaatgtag
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