Leishmania panamensis: LPMP_281850
Help
Entry
LPMP_281850 CDS
T06539
Name
(RefSeq) RNA methyltransferase, putative
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_281850
Enzymes [BR:
lpan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
LPMP_281850
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
Other ribosome biogenesis factors
LPMP_281850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
RsmF-B_ferredox
ATP-grasp
Motif
Other DBs
NCBI-GeneID:
22576630
NCBI-ProteinID:
XP_010700525
UniProt:
A0A088RUW6
LinkDB
All DBs
Position
28:complement(671766..673517)
Genome browser
AA seq
583 aa
AA seq
DB search
MDVYRQAAEIVGVVRAGNGTAKALCLRKAMQKKRQTYAVVCETLRHYELLEDVLEVAEFF
KYYPQANHEFAMCMAYDVVLGKGVNTHNDSTARAITQSASYLREAYWQVHKHHIIPPRSN
EKLEDEVAPDTSGGARGKIGPGDGAFSSHSLQLPRYARVNTLKISVEELVSRLRRSSEAR
KRARDAEDGDGNTAVRSHSQQQDSDKRTTRRASLRLHVPLPEFTQDPIVPDLLVFPPGTD
LHAHPAVRSGQLILQDRASCLPAAVLLDAVPVEIIEDNKASSSSSGGGGKTKGHGKALVK
AELEDNKTATAARKQLEYVVDACAAPGNKTTHLAALGAPHLKIMATERDERRAELLSKRV
TSLGAADYVNVVNMDFFQLSSDDRAATEGILLDPSCSASGVMTRVDVALQHHHVQQQQQG
KGQPADRAVSSRQGGRCGGHPKNAAAGEGQLDGDTEEAITSGAINPDAQGNDFSMKEERV
EKLARLQRKLLAHSLLSFDNCRTVVYSTCSVHEEENEEVVRQVLDDERVKARGWRLSNIM
PDTWKTRGVEREDEAHPLHFTIRCDPATDATNGFYVARFDRVC
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatatcgtcaggcggctgagattgtcggtgtcgtgcgcgcaggcaacggcaca
gccaaggcgctctgtctgcgaaaagccatgcaaaagaagaggcagacctacgctgttgtg
tgcgagacgctgcgccactacgagctgctcgaggacgtgctggaggtggcggagttcttc
aagtactacccgcaggcgaaccacgagtttgcaatgtgcatggcctacgatgtagtgctc
ggaaagggagtcaacacccacaacgacagcaccgcgcgtgctataacacagtcggcctcc
tacttgcgtgaggcgtactggcaggtgcacaagcaccacatcatcccgccgcgcagcaat
gaaaagctggaagatgaggtggcgcccgacacaagcggtggcgcgagagggaagataggc
cctggcgacggtgcgttctcatcccactcgctgcagctgcctcgctacgcgcgtgtgaac
actctcaaaatctcggtggaggaactggtgagtcgactgcgccgctcctcagaggcgcga
aagcgcgcccgcgatgccgaggacggtgacggaaacaccgctgtccgttctcactcccag
cagcaggacagcgacaagcgtactacacgtcgcgcgtcgttgcggttgcacgtcccgctg
ccggagttcacgcaagaccctattgtgccggatctgctggtttttccacctggcacggat
ctgcacgcgcacccagcggtgcgaagtggtcagctcattctgcaggatcgcgcttcgtgc
ctccctgcggcggtgctgctcgacgccgtccctgtcgagataattgaagacaataaggcc
agcagcagcagcagtggtggtggtggaaagacgaaggggcatggtaaggcgctggtgaag
gcggagttggaggataataagacggcgacggcggcacgcaaacagctggagtatgttgtg
gacgcctgcgccgcaccaggtaacaaaacaacgcacctcgctgcgctcggtgcaccacat
ctcaagatcatggcgaccgagcgtgacgagcggcgtgcggagctgctgtcgaagcgggtg
acatcgctcggcgcggcggactacgttaatgttgtgaacatggacttcttccaactctct
tccgacgaccgtgctgcgacagagggcatcctgctcgaccccagctgcagcgccagcggt
gtcatgacccgcgttgatgtggcccttcagcatcaccacgtgcagcaacagcagcagggc
aaggggcagccggctgacagagcggtttcctctcgccagggaggtcggtgtggtgggcat
cccaagaatgcggcagcgggggaaggacagctggacggcgacaccgaagaggccatcact
agcggcgccatcaaccccgacgctcagggcaacgacttctcaatgaaggaggagcgggtc
gagaagctggctcggctgcagcgcaagctcctggcgcattcccttctttcctttgacaac
tgccgcaccgtcgtctactccacctgctctgtgcacgaggaggagaacgaggaggtggtg
cggcaggtgctggatgatgagcgagtgaaggcgcgtggatggcgactgagcaacattatg
cccgatacgtggaagacacgtggtgtggagagggaggacgaggcgcacccactgcacttc
accatccggtgcgatccggcaacggacgcgacgaacggcttctacgttgcccgctttgac
cgcgtgtgctaa
DBGET
integrated database retrieval system
