Leishmania panamensis: LPMP_281930
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Entry
LPMP_281930 CDS
T06539
Symbol
RPA1
Name
(RefSeq) replication factor A, 51kDa subunit, putative
KO
K07466
replication factor A1
Organism
lpan
Leishmania panamensis
Pathway
lpan03030
DNA replication
lpan03420
Nucleotide excision repair
lpan03430
Mismatch repair
lpan03440
Homologous recombination
lpan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPMP_281930 (RPA1)
03420 Nucleotide excision repair
LPMP_281930 (RPA1)
03430 Mismatch repair
LPMP_281930 (RPA1)
03440 Homologous recombination
LPMP_281930 (RPA1)
03460 Fanconi anemia pathway
LPMP_281930 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpan03000
]
LPMP_281930 (RPA1)
03032 DNA replication proteins [BR:
lpan03032
]
LPMP_281930 (RPA1)
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_281930 (RPA1)
Transcription factors [BR:
lpan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LPMP_281930 (RPA1)
DNA replication proteins [BR:
lpan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
LPMP_281930 (RPA1)
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
LPMP_281930 (RPA1)
MMR (mismatch excision repair)
LPMP_281930 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
LPMP_281930 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Zn_ribbon_TiaS
Zn_ribbon_15
Zn_ribbon_6
tRNA_anti_2
DZR
Motif
Other DBs
NCBI-GeneID:
22576638
NCBI-ProteinID:
XP_010700533
UniProt:
A0A088SDK1
LinkDB
All DBs
Position
28:complement(709850..711253)
Genome browser
AA seq
467 aa
AA seq
DB search
MQQPGSHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAAIR
ATVFNDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTS
TAALPMQRYNFVPIEFLKQREVGSLVDVLGVVLKVDDVSSITQKSTGRELVKRNVKMGDM
TAAVEVTFWNDEAQTWGYPIGTVVALRQLKVGSFDGVTLSSTYQTKIDVNPTDLPDVKKL
ATWYVSTGGANVTSLSSQGLGAINGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVP
IYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWL
TLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEE
SDRLRMSVVRISEFMPIAGTSEDTRRRLAQNLRAECDEILRLIEAYV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgggcagccaccagatccagcccatcgactcccttacaccgtttctcggt
ggcaagtggtggattcgggcacgtgtgacagacaagacggacatccgtacctggaacaag
ccgacgtcgcaaggaaagctcttctcctttaccctcattgacgagtctgccgcgattcgg
gcgacagtcttcaacgacgccgtggacaccttcgaaccgctcatcgtcaatggacaggtg
tactacttcagcggtggccaggtgaagaatgcaaaccggcgtttcagcaacgtgaacaat
gactacgagctcacgttcgaccgcagctcggagattatgttggcgcggcaggacacatca
accgcggcgctaccgatgcagcgctacaactttgtgccaatcgagtttctaaagcagcgc
gaggtcggctccctcgttgacgtgcttggtgtcgtgctcaaggtagacgatgtgtcatct
atcacgcagaagtcgacaggccgcgagctggtaaagcggaacgtcaagatgggcgacatg
acggcagctgtggaggtcaccttctggaatgacgaggcgcagacttggggctacccgatc
ggcaccgttgtggcgctgcggcagttgaaggtcggcagttttgacggcgtgaccctctcc
tccacctaccagactaagatcgacgtcaaccccacagacctgccggacgtcaagaaactc
gcgacgtggtacgtgtcgactggcggcgcgaacgtgacgtcgttgtcgtcgcaggggctt
ggcgcaataaacggcgccggtggcgagagcgaccgcgggcgcaagtacctcgacgagatc
cagtcggaagggattggccggggactgaagcccgagtacgtcgacgtccgatgcgtcccc
atctacttcaaacaggacgcccagtggtacgacgcgtgcccgacgtgcaacaagaaggtg
accgaggagggtgctcagggagatcgcttccgctgcgagaagtgcgacaagacggttaca
ccaacgcagcgctacctcgtctccatccaggtcacggacaacgtctctcaggcgtggcta
acgctgttcaacgaagccggcatcgagttcttcgggatggaggcggcggagctgaagagg
cgtgcacaggaggaccccctctacatcgcgaagttagcacagggccgcatgaacaggccg
gtggtgatgcgtctgcgcgtgaaggaggagacgagctcgaacgccatgaccggcgaggag
tcggaccggctgcgcatgtcggtggtgcgcatttcagagttcatgccgattgccggcacc
tccgaggacacacgccgccgcctcgcgcagaacctgcgcgcggagtgcgatgaaattcta
cgcctcatcgaggcgtacgtgtga
DBGET
integrated database retrieval system
