Leishmania panamensis: LPMP_291790
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Entry
LPMP_291790 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lpan
Leishmania panamensis
Pathway
lpan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPMP_291790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpan03032
]
LPMP_291790
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_291790
DNA replication proteins [BR:
lpan03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
LPMP_291790
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
LPMP_291790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
RTT107_BRCT_5
PTCB-BRCT
Ins_P5_2-kin
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
22576942
NCBI-ProteinID:
XP_010700784
UniProt:
A0A088SED9
LinkDB
All DBs
Position
29:complement(767230..770748)
Genome browser
AA seq
1172 aa
AA seq
DB search
MEVPATRPEVTTTGIYGEELSVIRQRLLHSDLCWCGDLTSRTQVLIVGSTTCAASRKLAV
ARMRGLPCVSIEWVTDGACAMEFTGRFDIGRSLTGKEVCTTGLHHLERERVQAACGACHA
TYNATLTRHCGLLVASAVALGFTSPSASPPVTSNDKVRFARKRGVPVIAMEEFVLRYSTE
QFCGHHLPVEDAAPGQIVRDMSSLKAPSGLSRTSSSSAHKDLTFELKPKVGYSPTGAPAD
SPSSSNANEVLVYGSVRPSALPAQSAIPTPRSSLTSRGFSITRVQGSCDTEGAWKGFDNS
IPSSIQPSMLSLQVMPTASTTPCSSSPGLSRRPLADEFSDVVAYFSPPHRLTTQRHDLLI
SMGITLSPKLTPFTTHVLILGEGVEECLYPRPGLQIVSWQWVLQCRLEQRRLSCVGFRVE
CVFRPVVTFTGLAPADRYALLSALQKSGLPVRVQEALVLGGSGGERYGSASSLPTVSVSD
PYLPRNTTHLVAPRGQLLSSQKVAVLAQHHYRHTSRPRQHSSAPLTSTSTCRLVGVEWVY
QSIQQAQWLDADFFTLKVPTPEAFAITEEARTNATCTTLPRSCQASQERFSVGLQISEPS
STSAMATNLAMQTSALRQSSSSLAHCPRSQDAIECVLEGGLEKFAVVGRAVEEEEEEEAA
PSQQRSTAVGHASETVSPAPPPHRLRDYDDEEAGGESSLAAAAVRSTLQAIHTTPPQPSP
APSHSAPSSSSTDKQDGGATYAKDDLAATLHHHADPALSSHTYLATQCSPSFENLLEELE
AGLPRTLFGAAAVHASLHPHPPARTTENASAVSAPSGSDRGDQIQRAGSYAATPPPTVAD
LCIERCTFRRRISAQSHMIQQKQQLLGGTISDESQIIFYQMGLNEDGGIPAAPLVVLPDT
SCAISEAGEKAAVGAAIPPARCIAEAITHIYPRSTSTSAVFLVTKDVLKSDFDVFACHFP
HVQCTSKPEECTHFITAKPSKTEQFLCCLAAGRWILTPAYVAACAQAGYLVSEEPFEWCA
EMAASLGCRSSVASLARGCRVQREASKLPFASWKVRVCCTNSARATSFLRVLRSGGCTSL
EAATAAEVMAASRERGNEPSSSTELVLADDAVFSEDELDDFASRSASIVCPILRLEYLVQ
FLCVPDTSRSGMDLLRCVRSRKRSRTETAATE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaagttccggccaccagacctgaggtgacgaccaccggcatttacggggaggagttg
agtgtcatccgccagcgccttctgcacagcgacttatgctggtgcggggacctcactagt
cgcacccaggtgcttattgtcggttcgactacctgcgcagcatctcgaaagctggcagta
gcacgtatgcgcggactcccgtgcgtctccatcgaatgggtgaccgatggtgcctgcgcg
atggagttcacgggccgcttcgacatcggtcgcagtctgactgggaaagaggtgtgcacc
acgggcctacatcatcttgagcgagagcgtgtgcaagctgcgtgcggcgcgtgccacgcc
acctacaatgctacgctaacgcgacattgcgggttgctggttgcatctgcagtggcgctc
ggcttcacgtcgccgtccgcgtctcctccggtgacctcaaacgacaaagttcggttcgcg
cggaagcgcggcgtaccggtcattgcaatggaagagtttgtgttgcgctactcgaccgag
cagttctgcggtcaccacctgccagtcgaggacgcggcaccaggacaaatagtgcgtgac
atgtcgtcgctcaaggcgcccagcgggcttagcagaactagtagcagcagcgcccacaaa
gatctcaccttcgaactgaaacccaaggtagggtacagcccaactggtgcccccgctgac
tctcccagctcatcgaacgctaacgaggtgctggtctacgggtcggtgcgcccctcagcg
ctgccggcgcagtctgccataccgactcccagatccagtttaactagtcgtgggttcagc
atcaccagggtgcaaggctcttgtgatacagagggagcgtggaaaggtttcgacaacagt
ataccgagctccattcaaccgtctatgttgtcattgcaggtcatgcccactgcatcgaca
actccctgctcctcctcaccagggctgtcgcggcgcccccttgccgatgagttctctgac
gttgtcgcctacttcagccccccgcacaggctcacaacgcagcggcacgatctgctgatc
agtatgggaatcactctctctccaaagcttacgccgttcacgacacatgtcctcatcctt
ggtgaaggcgtggaggagtgcctctacccgcgtcctggcctgcaaatcgtgtcgtggcag
tgggtgttgcagtgtcggctggaacagcgccgattgtcatgtgtcggtttccgcgttgag
tgcgtcttccgtcccgtggtgaccttcacgggccttgcaccagcagaccggtacgcgctc
ctctcagcactgcagaagtctgggctgccggtgagggtgcaagaagccctcgtgcttggt
ggcagcggtggtgagcgatacggcagcgcctccagccttcccacagtgtcggtgagtgac
ccgtacctcccgcgcaacacgacgcatctagtggcacctcgtggccagcttctttcctcc
caaaaggttgctgtgctcgcccagcaccactatcgacacacttcgcgcccacgacagcac
tcgtcggcgccgctgacttcgacgtcgacttgccgtcttgtcggggtggagtgggtctat
caatctatccagcaagcgcagtggctggatgcggacttcttcacgctgaaggttccaact
cctgaagcgttcgctatcaccgaagaggcccgcacaaatgccacgtgcacgacgctacca
cgtagctgccaagcttcccaggagaggttctcggtggggttgcagatctctgaaccttcc
tcgacgtcagctatggcgacaaacctcgctatgcagacttcagcgttgcgccagtcatca
tcatcccttgctcactgtcctcgctcgcaggacgcaattgaatgtgtcttggagggaggt
ttggagaagttcgcagtagtagggagagcagtggaagaggaggaggaggaagaggcagct
ccatcccagcagcgcagcacagccgttggacacgccagtgaaactgtctcgccagcccca
ccaccccatcgtctgagagactatgacgacgaggaagctggtggcgaatcctcgttggca
gcagcggcggtgcgttcgactctgcaggcaattcacaccacccctcctcaaccctcccct
gccccgtcccactctgcgccttcttcatcgtcgacagacaagcaagatggcggtgcaacc
tacgcaaaggacgatctcgccgcgaccctacaccaccacgccgacccagcattgtcctcc
cacacatacctcgccacccagtgctcaccaagcttcgagaaccttctagaggagctggag
gctggtctaccacggacactgttcggggctgccgcggtgcatgcttcgcttcatccccac
cctccggcccgtaccacagagaatgcatccgctgtctccgctccatctgggagcgatagg
ggggaccaaattcaacgagctggatcgtacgcggctaccccgccgcccactgtcgctgac
ctgtgcatcgagcggtgcacgttccgtcgtcgcatctctgcacaatcgcatatgattcag
cagaagcaacaattactgggcggcaccatttcggatgaatcacagatcatcttttatcag
atgggcctcaatgaggacggtggcattcccgcagccccgctagtagttttgcctgacacc
tcatgtgcaatatccgaggccggagagaaggcggcagtcggggccgccataccgcctgcc
cgatgcatcgctgaagcaatcacccatatctatccccgctccacctccacctctgcggta
ttcctggtaacaaaggacgtgctcaagagcgactttgacgtctttgcgtgtcattttccg
catgttcagtgcacgagcaaaccggaggagtgcacgcattttatcaccgcaaagccttct
aagacagagcagttcctctgctgtctcgccgcggggcgctggattctgacgccggcgtac
gtcgcggcgtgtgcgcaggcggggtatcttgtcagcgaggagccgtttgagtggtgcgcc
gagatggctgcgtcgctgggttgccgcagctccgtagcgtcgcttgcgcgaggctgtcgg
gtgcagcgcgaggcgtcgaagctgccgtttgcgtcgtggaaagtgcgtgtgtgctgcacc
aactccgcccgtgccacaagcttcctgcgagtgcttcgtagcggcggatgcacgtctctg
gaggccgccaccgccgcggaggtgatggcggcgtcgagggagcgtggaaatgagccatcg
tcgtcaacagagcttgtgctcgcggatgatgccgtcttcagcgaggatgagctagatgac
ttcgcatcacgttctgcttccatcgtctgccctatactgcggctggagtacttggttcag
tttctgtgcgtgccagacacgtcgcggtctgggatggacttgctgcgctgtgtacggtca
cgaaagcgcagtcgaacggagacggcggctaccgagtag
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