Leishmania panamensis: LPMP_300350
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Entry
LPMP_300350 CDS
T06539
Name
(RefSeq) KU80 protein, putative
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lpan
Leishmania panamensis
Pathway
lpan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LPMP_300350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_300350
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
LPMP_300350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
22577089
NCBI-ProteinID:
XP_010701070
UniProt:
A0A088RYA5
LinkDB
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Position
30:complement(110089..112467)
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AA seq
792 aa
AA seq
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MSKDATVLVLDITLSRAAALEEACDLCTRILTDKMVYSPLDEVAVILAGTEKSRSALYDQ
SGQARYQHITVAVELGPATEKILVPIAATRAGVVALPGGATVQRPVTEAYDFIDALQVAV
ALLQARTSQRRYNRCIYLLTDARHEVRHKEDLLFLIDALQHDQITLVVIGFDFQALPAGT
ASQEECDESSTGDTSAWVGLDRKAQNEKVLGALCTELGPPSTLISPAEALDRLSLLHCRK
IRQQPMFKIALRIGDVRLATQLFTLTQEERLPALRRSTQDGADVVQSVEYVTPSDVDEQP
RALAKEERMEVFFFGADRVSCSEADREEMKVKGPRALEAIGFVGETEVGPCLLMGGTRAL
LPLAGDHAGQRGFNALVDAMVSSGKAMLVRLVRTAHATPLLCVCFARVAETASGQRHLVL
APLPFAEDMRALRFSEYPEVRFSEAEEQLMDELIDGLSVDGSVLAPQDTFNPVLQQYYAT
LQAKLLALNASAEKSNTKVPSSEAAVPQLLPLLRGTSTDFFAEGSGVYEAVSAHRSALAS
CASAFPYEEELDALFPGSKGAGWSEKSWYQSLTPSSSLMATEAGVPPSATQGSGGAPSTI
AAAIIRDLKCSADADNASAGSHATSEAASISTAPHDIMSGGPSFVITTVDPVGTFSMVVR
NPTATEAQLSKAKDDLSNLIWELLRSSVKDAFYRKCMACIMALRQFCVTQDDAAYYSDFL
LKLAVVAQQCGRDADFWIPYVVERKDSANVWPITAQECTSATLPDDTAAESFLQKIHLDL
AIAPDDVTDADD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggatgctaccgtgctggtgctggacatcaccctctcccgtgcagcggcgctg
gaggaggcgtgtgacctgtgcaccagaattctcacggacaagatggtatactcaccgttg
gacgaggtggcggttattctagctggcacagagaaatctcgaagcgccctgtacgaccag
tctggccaggcgcggtaccagcacatcacagtggccgtggaactcggaccggcaacggag
aagatcctcgtacctattgccgctactcgcgcaggtgtcgttgcgctgcctgggggcgcc
actgtgcagcggcctgtcacggaggcgtatgacttcatcgacgcccttcaggtggcggtg
gcgcttctgcaagcgcgcaccagtcagaggaggtacaaccgctgcatttacctcctcaca
gacgcccgccacgaggtgcggcacaaggaggacctgctttttctcatcgatgccttgcag
cacgatcagataacgttggtggtgattgggttcgactttcaggcgctgccagcaggcact
gcctcacaggaggagtgtgacgagtcctccacgggtgacactagcgcgtgggtcgggctc
gacaggaaagcacaaaacgagaaagtactcggggcgctgtgcaccgagctggggccgccg
agtacactaatcagccccgcggaggcgctggaccgtctctcgctgctgcactgtcgaaag
atccgacagcagcccatgttcaagattgcgcttcgcatcggcgacgtgcgactcgccaca
cagctgttcactctcacgcaggaggagcggctgccggcgctacgtcggagcacccaagac
ggcgcggatgtggtgcagagcgtcgagtacgtcacccccagcgatgtggacgagcaaccg
cgtgccttggcaaaggaggagcggatggaagtgttcttcttcggtgccgatcgcgtctcg
tgcagcgaggccgatcgagaggagatgaaggtaaagggcccacgcgcgctagaggcgatc
gggttcgtcggggagacggaggtggggccgtgtctgctgatgggcggcacacgcgcgctg
ctgccgctggcgggcgaccatgccggacagcgcggtttcaacgccttggtggacgccatg
gtatccagcggcaaggcgatgctcgtgcgactcgtgcgcacggcacacgccactccgttg
ctgtgcgtgtgttttgcgcgggtggcagagacggcttcggggcagcgccacttggtgctg
gcacctctcccgtttgccgaggacatgcgagcccttcgcttctccgagtacccggaggtg
cggttcagtgaggcggaagagcagctgatggacgagctgatcgacggcctctccgtcgat
ggctcggtgctggcgcctcaggacaccttcaacccggttctacagcagtactacgccacc
ttgcaagccaagctgctcgccctaaatgcctcagccgagaaaagcaacacgaaggtgccc
tcgtccgaagcggcggtgccgcaattgctgcctctgctgagggggacctccacggacttc
ttcgcggagggcagcggtgtgtacgaggcggtgtcagcgcaccggtccgcccttgcgtct
tgcgcaagcgcgttcccgtacgaagaggagttggatgcactcttcccagggagcaaaggc
gcaggctggagtgaaaagtcgtggtaccaaagcttgacgccgtcatcatcactgatggcc
actgaagccggcgtgccgccgtccgcaacacaggggtctggcggtgctccgtccacaatt
gccgctgccattatcagagacttgaagtgcagcgcggatgcggacaacgcgtctgccggc
agccacgccacgtcggaggcagcgagcatctccactgccccacatgacatcatgagcggt
ggtccctcattcgtgattacaaccgttgacccagtgggtactttctccatggttgtgcgc
aaccctacggcaacggaggcacagctgagcaaggcgaaggacgacctcagcaacctcatt
tgggagctcctgcgcagcagtgtaaaggatgccttttaccgcaagtgcatggcctgcatt
atggccctccgccagttctgtgtgacacaggatgacgccgcctactacagcgactttctg
ctcaagttggcggtagtcgcacagcagtgcggccgcgatgccgatttctggattccgtac
gtggtggagcggaaggacagcgccaatgtgtggcccatcacggcacaggagtgcacgtct
gccactctgccagacgacacagctgccgagtctttcctgcagaagatccacttggatctc
gccatcgcccccgatgatgtgaccgacgctgatgactga
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