Leishmania panamensis: LPMP_310160
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Entry
LPMP_310160 CDS
T06539
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2, putative
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lpan
Leishmania panamensis
Pathway
lpan03020
RNA polymerase
lpan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPMP_310160
09124 Replication and repair
03420 Nucleotide excision repair
LPMP_310160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpan03021
]
LPMP_310160
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_310160
Enzymes [BR:
lpan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPMP_310160
Transcription machinery [BR:
lpan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LPMP_310160
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LPMP_310160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
C1_1
APO_RNA-bind
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
22577442
NCBI-ProteinID:
XP_010701408
UniProt:
A0A088RWS0
LinkDB
All DBs
Position
31:complement(37285..40842)
Genome browser
AA seq
1185 aa
AA seq
DB search
MAQDELLDLEDPDMVLDDGFIDERDDENPNDDLDSEDIWEVISSFFREKGLVHQQLDSYN
DFLMRIPKMIESMAVIPRQDDQYDPGVTMEEQRDQPRLVLQDVVIGNPSHQTHSYFAGGP
LPPLFPNECRLRDMTYDAQAQVTLGVELYHPHADTPHDTFLRNVELGRIPIMLKSMRCNL
SGKDEDELPRLNECPHDQGGYFVINGTEKVLIAQERQAANHVYAFSRQKGLLCEVKSIVE
GSLNKPRTLQIIMPYRNRGPGSGFESLMCRVAQMDETIPLFVLFRAMDMVADKEILQTVV
PDLKDTAMLELLRGSMSDASTLQIFTREEALGYIGRRLGKQDAMANLQREAESLLMRDLL
PHMGTDPSANRTKCLYMGYMVHKLLLVALGRHEETDRDFLGHKRIDVAGTLLTVQLQTFL
AQVRKEMIKTLQDHAANPRGVFSFGRVIHSRLVTDGLRRCLATGNFGDLKTGNIKTGVAQ
TLNRLTYSSSLSNLRRIQNPIAASSKATRPRNLHCTQWGYICPVETPEGGSIGLLKNVAL
MCLMSRGTDHAEVVQAVQARIDGFRTIGLEDTADVRVARVFVNGTMIGVDRNPERLLHDL
RTRRRNGELSNEVSIVRDIRDREIRVFSDGGRCLRPLFVVENCHLKLRKSSIRDLLVSEK
AGGKKSISWNTVLKKGYVELIDCEEEDSLLVAMTPSEVEKNYYYSHCEMDPSMILGICAS
IIPYPNHNQSPRNTYQSAMGKQAMGIYASNFNMRMDTTAHVLFYPQKPLVRTKAMTYMHS
NDLPAGHNAVVAISCYSGYNQEDSIIMSRSAVERGFFRSAFWRSFKAKEERQKRDALETF
ENPNREVCRVKRADYSKLDTDGLIKPGMRVLGGDVVVGKTIPLPEADLDKLTTGNTKITK
RDASITSRTTEKGVVEKVMLTMNNSDRFAKVKIRTIKIPNIGDKFCSRHGQKGTNGIQFR
QEDMPFNRDGVVPDLIINPHAIPSRMTVAHLIETLAGKVACYKGGEVYATPFCSVVVDDF
GKALHALGSQRYGNECLYNGHTGLPLDHLIFFGPTFYQRLKHLSGDKIHARPRGPLQPLV
RQPTEGRAHEGGLRFGEMERDCMLSYGASQWLRERLFRVSDYYTVHVCNHCGTICVADTK
LNRYQCKGCENDTRISQVLMPYACKLLFQELMSMTILPRLGTGPL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggatgagctactggatctggaagaccctgacatggtcctcgatgatggcttc
atcgacgagcgcgacgacgagaaccccaacgacgacctcgacagcgaggacatttgggag
gtcatctcatccttcttccgggagaagggactcgtgcatcaacagttggattcgtacaac
gacttcctcatgcgcatccccaagatgatcgagagcatggctgtcatccctcgccaagac
gaccagtacgacccaggggtcacgatggaggagcagcgcgaccagccccggctggtgttg
caggacgtggtgattggcaacccgtcgcaccagacgcactcgtacttcgccggtgggccg
ctgccgccgctcttcccaaacgagtgccgtttgcgcgacatgacgtacgacgcgcaggcg
caggtgacactcggagtggagctgtaccatccgcacgccgatacgccgcacgacaccttc
ctgcgcaatgtcgagctgggccgtattcccatcatgctcaagtccatgcgctgcaacctc
agcggcaaggatgaggatgagctaccgcggctcaacgagtgcccgcacgaccagggaggg
tactttgtgatcaacggcacggagaaggtgctcatcgcgcaggagcggcaggctgccaac
cacgtctacgcgttttcccgccagaaggggctgttgtgcgaggtgaagtcgattgtggag
ggctcgctgaacaagccgcgtacgctgcagatcatcatgccgtaccggaacagaggcccc
ggcagcggcttcgagagcctcatgtgccgcgttgcgcagatggatgagacgattccgctg
tttgtgctgtttcgggcgatggacatggtggcggacaaggagatcctgcagacggtcgtg
ccggacctaaaggacaccgcgatgctggagctgctgcgcggctccatgagtgacgcgagc
acgctgcagatcttcacccgcgaggaggctctcggctacattggccggcgcctcggcaaa
caagacgccatggcgaacctacagcgggaagcggagagcctgctgatgcgggacttgctg
ccgcacatgggcacggacccttccgccaaccgcacaaagtgcctgtatatgggctacatg
gtgcacaagctgctgctcgtcgccctcggacgccatgaggagacggaccgtgactttctg
gggcacaagcgcattgacgtggcaggcacactgctgacggtgcagctgcagacctttctc
gcgcaggtgcggaaggaaatgatcaagaccctgcaggaccacgctgccaacccgcgcggc
gtcttcagcttcggccgtgtcatccacagcagacttgtcactgacggtctgcgccgctgt
ctcgccaccggcaacttcggcgacctcaagacgggcaacatcaagacaggcgtggcgcag
acgctgaaccgtctcacctactcgtcttcccttagcaatctgcgtcgcatccagaacccc
attgccgcctccagcaaggcgacacgcccgcgcaacttgcactgcacgcagtgggggtac
atttgccctgtggagacgccggagggcggctcgatcgggttgctcaagaacgtggcgttg
atgtgtctcatgtcccgcggcacagaccacgccgaggtggtgcaggccgtgcaggcgcgc
atcgatggcttccgcaccatcggtctcgaggacacggctgacgtgcgtgtggcgcgtgtg
ttcgtgaacggcacgatgattggcgtggaccgcaacccggagcggctgctgcacgacctg
cgcacgcggcgccgcaacggcgagctcagcaatgaggtgagcatcgtgcgcgatatccgc
gatcgcgaaatccgcgtcttctcggatggtggtcgctgtctgcgccctctcttcgttgtt
gagaactgccacctaaagctccgcaagtccagcatacgcgacctgctcgtctcggagaag
gcgggcggaaagaaatccatctcgtggaacaccgtgctgaagaagggctacgtcgagctg
attgactgcgaggaggaggactcgctgctggtcgccatgacgccgagcgaggtggaaaag
aactactactactcccactgcgagatggacccgtcgatgattcttggcatttgtgcctcc
attatcccctaccccaaccacaaccagtcgccgcgcaacacctaccagtccgccatgggt
aagcaggccatgggcatctacgcctcgaacttcaacatgcgcatggataccaccgcccat
gtccttttctacccgcaaaaaccgctggtgcgcaccaaggccatgacgtacatgcacagc
aacgacctgcccgccggccacaacgcggtggtggccatctcgtgctacagcgggtacaac
caagaggactctatcattatgagccgctccgccgtggagcgcggcttcttccggagcgcc
ttctggcgctccttcaaggcgaaggaagagcggcagaagcgcgacgcgctggagaccttc
gagaatcccaaccgcgaggtatgccgcgtgaagcgtgccgactactcgaagctggacacg
gacggcctcatcaagcccggcatgcgcgtcctcgggggcgacgtggttgtgggcaagacg
atcccgctgcccgaggcagacctcgacaagctcacgacgggcaacacgaagatcacgaag
cgggacgcgagtatcacctcgcgcactacggagaagggcgtcgtggagaaggtgatgttg
acgatgaacaacagcgatcgcttcgccaaggtcaaaattcgcaccatcaaaatccctaac
atcggcgacaaattttgcagccggcacggccaaaagggcaccaacggcattcagtttcgc
caggaggacatgcccttcaaccgcgacggggtcgtgccggacctcatcatcaacccgcac
gccattccctcccgcatgacagtggcccacctgatcgaaacactggccggcaaggtggcg
tgctacaagggcggcgaggtatacgcgacaccgttctgctccgtcgttgtggacgacttt
ggcaaggccttgcatgccctcgggtcgcagcggtacggcaacgagtgcctctacaatggg
cacacagggctgccgctggatcatctgatcttcttcggccccaccttctatcagcgcctg
aaacacttatctggagacaaaatccacgcccggccacgtgggccgctgcagccgctggtt
cgtcagccaaccgagggtcgcgcgcacgagggtgggctgaggtttggcgagatggagcgt
gactgcatgctctcctatggtgcatcgcagtggctgcgggagcgcctcttccgcgtcagt
gactactacacggtgcacgtgtgcaatcactgtggcaccatctgtgtggccgacacaaag
ctcaaccgctaccagtgcaaaggttgcgaaaacgacacgcgcatctcccaggtgctcatg
ccgtacgcctgcaagctcctcttccaagagctcatgtccatgacaattttgccgcgcctc
ggcaccgggcctctgtga
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integrated database retrieval system
