Leishmania panamensis: LPMP_312810
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Entry
LPMP_312810 CDS
T06539
Name
(RefSeq) squalene synthase, putative
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lpan
Leishmania panamensis
Pathway
lpan00100
Steroid biosynthesis
lpan01100
Metabolic pathways
lpan01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
LPMP_312810
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lpan01006
]
LPMP_312810
Enzymes [BR:
lpan01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
LPMP_312810
Prenyltransferases [BR:
lpan01006
]
Terpene biosynthesis
Squalene/phytoene synthase
LPMP_312810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
bPH_2
Motif
Other DBs
NCBI-GeneID:
22577707
NCBI-ProteinID:
XP_010701665
UniProt:
A0A088RZZ0
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Position
31:complement(1251100..1252344)
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AA seq
414 aa
AA seq
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MGLLSDSLAMMRVKWQMRSVKLQVPPEEADLRFCYEVMDDVSRSFAAVVAQLADQQLRDA
ICIFYLVLRALDTLEDDMSVPVNVKLKEMPKFHTRMSDTNWSMTGVGEGRERELLEKYPC
VAREFKKLRKEYRDVIANICERVANGMCEFLQRPVVTLDDYNLYCHYVAGLVGHGLTHLF
ARCGFEDSHLDEDLTNSNHMGLFLQKTNIIRDYYEDICDEPPRMFWPKDIWNLYATELKD
LKRESNSAAAVQCLNAMVADALVHVPYVVDYLSTLQDPSVFRFCAIPQVMAIATLKEVYN
NPDTFHVKVKVSRPESCRIMLKTTTLYSSLSLFRDYCVELQEALDRDDPSSTSIANSLAA
AIERIDMELKKCQDVSYTRSLLARYPGLGGQFVLTVMDTVSGFFGGRREIVGHA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctttcggattcgttggcgatgatgcgtgtgaagtggcagatgcgctctgtg
aagcttcaggtgccgccggaggaggcggacttgcgcttctgctatgaagtcatggacgat
gtctcccgctccttcgcggccgttgtggcacagctggcggaccagcagctccgcgacgcc
atttgcatcttttaccttgttctgcgtgccctcgacaccttggaggacgacatgagtgtc
ccggtaaacgtgaagctgaaggagatgccaaagtttcacacgcgtatgagtgacacgaat
tggtccatgaccggcgttggcgagggacgcgagcgtgaactgctggagaagtacccgtgc
gtcgcgcgagagttcaagaagctgaggaaggagtatcgggacgtcattgccaacatatgt
gagcgcgttgcgaacggcatgtgtgagttcctgcagcgccccgtggtgacactggacgat
tacaacctatactgccactatgtcgccggcctcgtcggccatggcctcactcacctcttc
gcccgctgcggctttgaggactcgcacctggacgaggacctcaccaattccaaccacatg
ggcctcttcctgcagaagacaaatatcatccgcgactactacgaggacatctgcgatgag
ccgccgcgcatgttctggccgaaggacatatggaacctttacgcgacggagctgaaggat
ctaaagagggagtcgaacagtgcggcggcggtgcagtgcctgaatgccatggtggccgac
gccctcgtgcacgtcccgtacgtcgtggactatctttccactctgcaggacccgtctgtg
tttcgcttctgcgccatcccccaggtgatggccattgccacgttgaaggaggtgtacaac
aaccccgacacattccacgttaaggtcaaggtgtcgcggccggagtcctgccgtatcatg
ctcaagaccacgaccctctacagctctctcagcctgtttcgcgactactgcgtcgagctg
caggaagcgctagacagggatgaccccagctccacgtctatcgccaactcgcttgcagca
gcgattgagcggattgacatggagctgaagaagtgccaggatgtctcctacacacgcagc
ctccttgcccgctacccaggccttggaggtcagttcgtgctcactgtcatggacaccgtc
tccggtttctttggcggccgcagggagatcgttggccacgcgtga
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