Leishmania panamensis: LPMP_320430
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Entry
LPMP_320430 CDS
T06539
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_320430
03041 Spliceosome [BR:
lpan03041
]
LPMP_320430
03036 Chromosome and associated proteins [BR:
lpan03036
]
LPMP_320430
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPMP_320430
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
LPMP_320430
mRNA cycle factors
Common to processing body (P body) and stress granule
LPMP_320430
Spliceosome [BR:
lpan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LPMP_320430
Chromosome and associated proteins [BR:
lpan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
LPMP_320430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
AAA_22
Utp25_C
GRIM-19
ResIII
Motif
Other DBs
NCBI-GeneID:
22577784
NCBI-ProteinID:
XP_010701730
UniProt:
A0A088S055
LinkDB
All DBs
Position
32:complement(<153412..>155226)
Genome browser
AA seq
604 aa
AA seq
DB search
MYKDQTSLQQQQQEPSSVAIAMGGHGGYQQPIRQYGGGNRGFNDGQGGYGGGFNRNGGGA
GFRGGFGGFGGGMRGPQREYGGNNHYHREEKSEEEIFKEHTPGINFDQYEAIKVSIAPND
VEPAESFATMGLSSALAENVSRCRYQKPTPVQKYGIPCVLKGSDLMACAQTGSGKTAAYL
IPAINFMLVNNLNRAKPTNSQSAPSALVLSPTRELSIQIYEEGRKFTYRTGIRCVVVYGG
ADPRHQIHELTRGCGLLVATPGRLSDMFTRGYTRYSDVRFLVLDEADRMLDMGFEPQIRA
IVQGPDSDMPPPGERQTLLYSATFPKEIQQMAREFLYRHYFLQVGRVGSTTENITQDVRW
VEDMDKRGCLLEVLKEHQGERVLVFVEKKRDADYLERYLRQSRIPCSSIHGDRVQREREE
ALDIFKSGVCRVLVATDVASRGLDIPNVAVVVQYDLPSNIDDYVHRIGRTGRAGKRGTAI
SFFNEKNRNVVDDLIPLLRETNQTVLPEVQALAKKPNVQNQPRGRGRGGFRTGGGFGGGF
GGGFGGRGGYRGGGGGFGGGFGGGYNGGYAGNNGGYRPRGGYSGGGYGGGYGGDRNMRSD
VFGQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggaccagacctcacttcagcagcagcagcaggagccctcttctgttgctatt
gcgatgggcggacatggcggctatcagcagcccattcgccagtatggcggtggcaaccgc
ggcttcaacgatggccagggcggctacggtggcggcttcaaccgcaacggcggcggcgcc
ggcttccgtggtggcttcggcggcttcggcggtggcatgcgaggcccgcaacgtgagtac
ggcggcaacaaccactaccaccgcgaggagaagtccgaggaggagatcttcaaggagcac
acgcctggtatcaactttgaccagtacgaagcgattaaggtgtccatcgcccccaacgac
gtggaaccagcggagtcgtttgccacaatggggctctcctcggcgctggcggagaacgtg
agccgctgccgctaccagaagcccacccctgtgcagaagtacggcattccatgtgtgctg
aagggcagtgatctgatggcgtgcgcccagactggctccggtaagactgccgcctacctt
atcccagccattaacttcatgttggtgaacaatctcaaccgtgccaagcccacaaacagc
cagtccgcaccgtctgcgctggtgctgtcgccgacgcgcgagctgtccattcagatctat
gaggagggccgcaagttcacttaccgcaccgggattcgctgtgttgtcgtctacggcggt
gcagacccacgccaccagattcacgagctgacacgcggctgtggtctgctggtggcgacg
ccaggccgtctgtctgacatgtttacccgcggctacacgcgctactccgacgtccgcttc
ctcgtcctcgatgaggcggatcgcatgcttgatatgggctttgagccgcagatccgcgcc
atcgtccagggcccggacagcgatatgccgccgccgggtgagcgccagaccctgctgtac
tcggccactttcccaaaggagattcagcagatggcccgtgagttcctataccgccactac
ttcctgcaggttggtcgtgtgggctcgactactgagaacattacccaggatgtgcgctgg
gtcgaagacatggacaagcgtggctgcctgttggaggtgctgaaggaacaccaaggtgag
cgtgtcctcgtattcgtagagaagaagcgcgacgccgactatctggagcgctacctacgt
cagagccgcatcccctgttcctccatccacggcgaccgcgtgcagcgcgagcgggaggag
gccctcgacatcttcaagagtggtgtgtgccgtgtgctggtggcgaccgacgtcgcttcg
cgtggtcttgatatccccaatgtcgcggtggtggtgcagtacgacctgccgagcaacatc
gatgactacgtacaccgcatcggccgtacgggtcgtgctggcaagcgcggcacggcaatc
tccttcttcaacgaaaagaaccgcaacgttgtcgatgacctgatcccgctcttgcgcgaa
acgaaccaaacagtactgcccgaggtgcaggcgctggccaagaagcccaacgtgcagaac
cagcctcgtggtcgcggccgcggtggcttccgcactgggggcggctttggtggtggtttc
ggtgggggcttcggcggtcgtggcggataccgcggcggcggtggcggctttggcggcggt
tttggcgggggctacaatggtggctacgccggcaacaacggcggctaccgaccccgcggc
ggctacagtggcggtggttacggtggaggctacggcggtgaccgcaacatgcggtctgac
gtctttggtcagtag
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