Leishmania panamensis: LPMP_320620
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Entry
LPMP_320620 CDS
T06539
Name
(RefSeq) ATP-dependent RNA helicase-like protein, putative
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_320620
Enzymes [BR:
lpan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPMP_320620
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
90S particles
Helicases
LPMP_320620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
22577803
NCBI-ProteinID:
XP_010701749
UniProt:
A0A088RY62
LinkDB
All DBs
Position
32:199514..201268
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AA seq
584 aa
AA seq
DB search
MDAFRSLTIGAKFSAARNGEAAKLFRNAGKDKGSRGLPDAIGANGGVVVESASDLGCSSL
SVPPPSATLNLFGHPTRSLGHANAHLGESGGSDAATAKGTASEDKPLKAMTFKKKRNIWH
RNELQVTGMDLPAPIEHFSDLVRPPLSVPRNIVNNLFARQHKVPTPIQMQAIPSLIHHRD
VLACAPTGSGKTIAFLTPLFALLRAPDATCGVRALIVTPTAELAQQIEREAFFLTKGQRW
RFVQHGQTTKNKDIFIATPGRIALLLEQKLLDLSNVQYLVFDEGDRLWDSRTDFLIVIDK
ILTACTRTDKVVSLFTATLSEKVEAAARSVMGTDPVRIIVHGRRFASTHVRQRLVFCGNE
LGKVVAMRNLVREGITPPVLVFVQSVERSKELYEEIRAQGLHMAIMHAKMTVEQREETVL
QFRLGKIWVLVTTELLARGIDFKNVGTVINFDFPATVDSYIHRVGRTGRAGKEGTAITFF
TEDDKERLPPIAKVMQDSGNAVEDWILNIKVDRSTRRRLERTTPQRTIVSTRKRMLVAQQ
RVQRQYRRLEEEEAEKKAKKRAAKKGKDRVDCDSDGSNDNDDDV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttcggtcgctgacgattggagccaagtttagtgctgcccgaaacggcgag
gcggccaaactgttccgcaacgcgggcaaggacaagggcagccgcggacttcctgacgct
atcggcgctaatgggggggttgtcgttgagagcgcatcggacttgggctgcagcagccta
tcagtgccgcctcccagtgcgacactgaaccttttcggacaccccacacgaagtctaggt
catgctaacgcgcacctcggtgaatctggaggctcggacgcagccactgcgaagggtaca
gcctccgaggacaagccgctcaaagcaatgaccttcaagaagaaacgcaacatctggcac
cgaaacgagctgcaggtgacaggtatggacttgccggcgccgatcgaacacttctccgac
ctcgttcgcccaccgctaagcgtgccgcgcaatatagtgaacaacctcttcgcccgccag
cacaaagttcctaccccaatccagatgcaagcaattccatccctcatccaccaccgcgac
gtactcgcctgcgcgccaaccggctccggcaagacgattgcttttctcacccctctcttt
gcgctgcttagggcaccggatgcaacctgcggtgtgcgtgccctcattgtaacacccacc
gccgagcttgcccagcagatcgagcgcgaggcattcttcttgacgaagggccagcggtgg
aggtttgtgcagcatggccagacgaccaagaacaaggacatttttattgccacgccgggc
cgtatcgcattgctgctggagcagaagctgctggacctgagcaacgtgcagtatctcgtt
tttgacgagggcgatcgcttgtgggacagcaggacagactttttgattgtgattgacaaa
attctcactgcctgcactcgcaccgataaggtagttagcctgtttacggccacgctgagc
gagaaggtggaggcagctgctcgctctgtcatgggtaccgacccggtgcgcatcattgtc
catggtcgacgcttcgcgagcacgcacgtgaggcagcgattggttttctgcggcaatgaa
ctcggcaaagtcgtagcgatgcgcaaccttgtgcgtgagggcatcacgccaccagtgcta
gtgtttgtgcaaagcgtggagcggtccaaggagctgtacgaggagatccgggcgcagggc
ttgcacatggccattatgcacgccaagatgacagtggagcaacgcgaagagacggttctg
cagttccgtcttggcaagatctgggtcctcgtgacgacggagctgcttgcacgcggtatt
gatttcaagaacgtcggcacagtcatcaacttcgactttccagcaactgtggactcgtac
atccaccgtgtgggtcgcacgggccgcgccgggaaggaagggacggcgatcactttcttt
acggaggatgacaaggagcgacttcccccgatcgcgaaagtgatgcaggattctgggaac
gctgtggaggactggatactgaacataaaggtggatcgcagcacccgccgccgcctcgag
cgtacaacgccgcagcgcactattgtcagcacgcggaagcgcatgctggtggcccagcag
cgagtgcagcgtcagtaccgccgcctggaggaggaggaggctgagaaaaaggcaaagaag
agagccgccaagaagggcaaggaccgcgttgactgcgacagcgacggcagcaatgacaat
gacgatgacgtatag
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