Leishmania panamensis: LPMP_320770
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Entry
LPMP_320770 CDS
T06539
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4p
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
lpan
Leishmania panamensis
Pathway
lpan03018
RNA degradation
lpan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LPMP_320770
09123 Folding, sorting and degradation
03018 RNA degradation
LPMP_320770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpan03019
]
LPMP_320770
03041 Spliceosome [BR:
lpan03041
]
LPMP_320770
Messenger RNA biogenesis [BR:
lpan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LPMP_320770
mRNA degradation factors
5'-3' decay
Lsm complex
LPMP_320770
Spliceosome [BR:
lpan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LPMP_320770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
SM-ATX
Gemin6
Motif
Other DBs
NCBI-GeneID:
22577818
NCBI-ProteinID:
XP_010701764
UniProt:
A0A088RY79
LinkDB
All DBs
Position
32:<245206..>245556
Genome browser
AA seq
116 aa
AA seq
DB search
MSSARRPITPIEILRNCRGKEVSIELSDGETVNGTVMRTDRAMNVVIKQCTRTGADGESF
WKSRECFIRGASVKNVRMTDSALVSVPVPAKRKAAGSKGAHAHKEKFAAGRKRPRK
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgcacgccggccaatcaccccgatcgagatcttgcgtaactgccgcgggaaa
gaagtctccatcgagctttcggacggcgagacggtgaatggcaccgttatgcgcactgat
cgtgcaatgaacgtggtaatcaaacaatgtactcgcactggcgctgatggcgagtcgttt
tggaagtcgcgtgagtgttttattcggggtgccagcgtgaagaacgtgcgcatgacggac
agtgcactcgtctccgtgccggtgccagcgaaacgcaaggcggcaggtagcaaaggcgcg
catgcccacaaggagaaattcgcagcaggtagaaagcggccgcggaagtag
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