Leishmania panamensis: LPMP_320830
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Entry
LPMP_320830 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpan04131
]
LPMP_320830
Membrane trafficking [BR:
lpan04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
LPMP_320830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Motif
Other DBs
NCBI-GeneID:
22577824
NCBI-ProteinID:
XP_010701770
UniProt:
A0A088S092
LinkDB
All DBs
Position
32:<260386..>265332
Genome browser
AA seq
1648 aa
AA seq
DB search
MQLCSGAVSVHYREDVCQDGESVQFMAVNPSGTTLAVLTQLRVHFWSAGPKVVYLTSLAV
PGTSLEDNPAMYVLWRQRPGSHLAVITARHVAFYEADINLRSSEFLQTIERKRQAMYMHH
VDSASRVCYSSEVPIVTGLATSAVAAGPYAFLVTTTAGVVYVLGWHQQGILHQWTTVGLQ
GGGHTFWGITNEEGSNIVTAAVDDSALATTGTTLANSSLSLTAMRLSMPSTWSLSRPDPL
QRRCQQDLRVPSSEAIGDSTTSPAAAASAPALIPPPGTAVRRFATPFDSNGNATTSPPLP
DGEATKTAGPSEVDKNAKEPTADEQNVCANTSVNIKSQRLRQHNHLLSSFSATDAADAHR
STGAELLSGTILHASFASGWKVLSFVFTSGSVLLCRTSCGTNFTHQEVQLQGCVTPIISA
CMVAINVRHLLLAVCTQAGAISCRRIDGTSLAVHPNPLWKGLRGVSDAVSKYSSGVPCAS
KSLGLIAGMEWSPSEELLCVAFYRHGMTLVHYSGVVVTRHLSGPSTATLLRTPQVPAMDS
QLALDDETAVMGETAQPPPSSNAQKRVASLGCSAISWKPDGTRLWMAAPRQPYFFSTQLS
RVLTVDTVGPTFGHHSPLALLADNALYLVSLSEAATSEGVCEMVLVPDSYLRVQYPLLYG
AVSSDGSWITCAGRRGLALFNRERYSWKLPSKEESFSCIADPVWLCDVAVAVPALRTDSR
AFELVVLTTSSVSLSHASACVALDSRPTQLSCIHQDQRGEGYVVVVDFNQVVRVFRYNVF
TDALTRPSSAKPYVTLTPVQQLALPNELSNPLQVIPVFLRDDEDDREAPQRTEEQMELRL
ILHKRSDHTLVWLRGELGTAGDAASGFASSTGSLPHVSAVAEPIDPTNRFFLFRCWVDRT
APVRGMVLLAHVEEQGLVMYQLQLSSRRSTTMVAPVAHRIEVAATRDLELLPLCPSPFDG
YMLCVATDMSAPRPSHQHCAAGVIGGVNQASPRPQLALRPILYAHRILSLLLLEAMPSSL
VPPRVFSTQDVSASSFAARTIARQSSRFEGGATCAVATTSAISSSHAAEVDDRVVTFVWD
RNFFHWLEYMRLNDTFSAVFDYFLHTALNDSPPAAVQGLGRRSAVRATIALLRNYPEFYA
IVVGCVRKMDFTRWRLVLDFLGTPTDLFHECVAHYCYAEAVHLIRVIMMGTYKPVATLSV
NRVAELGSSGCAASDITPLQQASQCAVELFVLSVENGNYTAAYDIMRFMARLEEEIGMPP
TGGVDLHDGSGGGAGGSANSSDSFLTRWLRQLTFGGTEHFDAEAAVEGPTGTALSGKAKA
KGGSSSGAVTMTHWVEGFPTLVFDITRCDPARSGRAAEEAAEEVQRQTTVHHMFRRHHAL
PEAVHQEALRLLRTGYVLQLTRLMEIFSFSVAGFLQAVHPIFAAAAATTDVNDAGEGEVR
CDSVRVCLHDIFDGLHKELGLPRSFAVNVGPTVNTMWSAWVMEQRTAQAAALPGVLSSTN
PKVWTVAQSVLYASPSLLRSVEALHQLFSPIFVVDLAFCVVLMHKSNLISLLLSRETSTD
AHAGQPEDVATDSGAGSSVSPMKLIDALGQLDALLAVPENAGYRPFLQDVFTSLPPSILH
AIAPPVSPCAGVVASSSRNDATSTGATE
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtgcagtggtgccgtgagcgtgcactaccgagaggacgtctgtcaagatggc
gagtccgtgcagttcatggcggtgaaccccagtggcacaactttggcggtcctcacgcag
ctacgtgtccacttctggagtgcagggccaaaggtggtctacctgacctcacttgccgtg
cctggcacctcgctcgaggataatccagccatgtacgtgctctggcgccagcggccgggt
agccacctcgccgtcattacggctcgccatgttgcgttttacgaggcggacatcaacctc
aggtcgtccgagtttcttcagacaatcgaaagaaagcgacaggcaatgtacatgcaccac
gtcgactcggcgtcgcgtgtgtgctactcgagcgaggtgccgattgtaacgggacttgcc
acatccgccgtcgccgccggcccctacgccttccttgtgacgaccaccgctggtgtcgtc
tacgtactggggtggcaccagcaaggtatccttcatcagtggaccactgttgggctgcag
ggaggcggccacactttttggggtatcaccaacgaagaagggagcaacatcgtgactgca
gcagttgacgatagcgctctcgccacaacgggcacgaccctggccaattcgtccttgtca
ttgacagccatgaggttgtccatgccgtcaacgtggtcgctgtcgcgcccggatcccctg
cagcggcgttgtcagcaagacctacgggtaccttcctcagaggccattggtgactccact
acaagcccagctgcggcggcgtcagcacccgctctaattccgcctcccggcaccgctgtg
cgaagatttgcgacgccattcgattcgaacggcaacgccacgacttcgccaccgctgcca
gacggtgaggcgacgaaaactgccgggccatccgaggtggacaagaatgccaaggaacca
actgccgatgaacaaaacgtctgtgccaacacatctgtgaacataaaatcgcagaggctg
cggcagcacaaccacttgctttcttccttttcggctacagacgccgctgacgctcaccgc
agcaccggggcagagttgttgtccggcaccatcctgcacgcctccttcgcctctggctgg
aaggtgctgtccttcgtcttcaccagcggcagcgtgctgctgtgtcgaacctcctgcggc
acgaacttcactcaccaggaggtccaactccagggttgtgtgacgccaatcatatcggcg
tgcatggtggccatcaacgtgcgccacctcctgttggcggtgtgcacccaggcgggtgcg
atctcgtgccggcgcatcgatggcacgtccctggcggtgcatccgaaccctctgtggaaa
ggccttcgcggcgtcagcgacgccgtctccaagtattcttccggcgtcccgtgcgcctcg
aagtcgcttggcttgattgctggtatggagtggtcgccttctgaggagctgctctgcgtg
gccttttataggcatggcatgaccctcgtgcactacagcggcgttgtcgttacccgccac
ctgtcggggccatccaccgccactctcctgcgcactccacaagtgcccgcgatggactct
cagttggctcttgatgatgagacagctgtgatgggcgaaaccgcgcagccaccaccgtcg
agcaatgcccagaaaagggtggcatcgcttggctgctctgccatttcgtggaagccggac
ggaacgcgactctggatggcagctcctcgtcagccgtacttcttctcgacgcaactatct
cgtgtactgaccgtggacacggtcggacctaccttcggccaccactccccgcttgccctg
ctcgctgacaacgcgctttacctggtctccctgtccgaggcagccacctctgagggtgtg
tgtgagatggtactggtgccggacagctatctgcgtgtccagtacccgctcttgtacggt
gctgtgtcgagcgacgggagctggattacctgcgctggccgccgcggcctcgccctcttc
aaccgggagcgctactcgtggaagctgccttcgaaggaagagtctttcagctgcatagcg
gaccctgtatggctgtgcgacgtcgccgtggcggttccggcgcttcggactgactcgagg
gcatttgagctggtcgtcttaaccacctcgagtgtgtcactgtcgcacgcctctgcatgt
gtggcactcgattccaggccgactcagctttcctgcattcaccaggatcaacggggggag
ggctatgttgtggtcgtggactttaaccaagtggtgcgcgtgtttcgctacaatgttttc
accgacgccctcacacgaccgtcttccgcaaagccgtacgtcactctcacgccggtgcag
cagctggctctacccaacgagctctcaaaccctcttcaagtcattccagtgtttctgcgc
gatgacgaggacgaccgtgaggctccgcagcgcactgaggagcagatggagctgcgcttg
atactgcacaaacgtagcgaccacaccctcgtctggctccgaggggagctgggcacagcg
ggcgatgctgccagcggctttgcttcatcgactggcagcttgccgcacgtcagtgccgtc
gcggagccgatagacccaacgaaccgcttttttttgtttcggtgctgggtggaccgtacc
gcgccagtgcgcgggatggtgctgctggcgcatgtggaggagcaaggcctcgtcatgtac
cagctacagctgtcctcacgccgttcaactacaatggtggcccccgttgctcaccgtata
gaggtggcagcgacgcgggacttggagctgctgccgctctgcccttccccgttcgacggg
tacatgttgtgtgttgcaacagacatgtcggcacctcggccaagccatcaacactgtgcc
gccggcgtgattggtggtgtaaatcaagccagcccacggccgcagctggcgctgcgcccc
attctgtacgctcaccgcatcttgtcactgctactgttggaggcgatgccaagcagccta
gtgccgccgcgagttttcagtacacaggacgtcagtgcatcttcctttgccgccagaacc
atagcacggcagtcgtccaggttcgagggaggtgctacctgtgctgtagcaaccacatct
gcgatctcgtcttcccatgctgctgaggttgacgaccgtgttgtcaccttcgtgtgggac
cgcaacttcttccactggctggaatacatgcggctgaacgacacgttctcggcggtgttc
gactacttcctccacacggcgctcaacgactcgcctccggctgcagtgcaaggactgggc
agacgcagcgctgtgcgggcaaccatcgctcttctccgcaactaccccgagttttatgcg
atcgttgtggggtgcgtgcgcaagatggacttcacacgctggcgccttgtgctggacttc
ctgggaacaccgacggacttgtttcacgagtgtgttgctcactattgctacgcggaggct
gtgcacctgattcgtgtgatcatgatggggacctacaagccagtagcgacgctgtctgtc
aatcgagtggctgagttgggcagcagtggctgcgcggcgagcgatatcacgcctcttcag
caggccagtcagtgtgccgtggagctcttcgtcttgtctgtggaaaatggaaattacacc
gcggcctacgatatcatgcggttcatggcacgtctggaagaggaaattggcatgccgccc
acgggcggcgttgatcttcacgatggcagtggcggaggcgcaggcgggtccgctaattcc
tccgacagcttcttgacgcggtggctgcggcagcttacgttcggcggcactgagcacttc
gatgcagaggcagccgtggaggggccgacgggaacggcactgtctgggaaagcgaaggcc
aagggtggctcttcgagtggagccgtcactatgactcactgggtcgaggggtttcctacc
ctagtgttcgacatcacccgttgcgaccctgcacgaagcgggcgcgctgccgaggaggct
gccgaggaggttcagcgccagaccactgtgcatcacatgtttcggcggcaccatgcgctc
cctgaggcggtgcatcaggaagctctgcggctgctgcgcaccgggtacgttctgcaactc
accaggcttatggagatcttctccttctcagttgctggtttcctgcaggcggtgcacccc
atcttcgccgctgctgctgctactactgacgtcaacgatgctggggaaggagaggtccgg
tgcgattccgtcagggtgtgtctgcacgacatctttgacggtcttcacaaagagctcggc
ttgccccgcagttttgcggtgaacgtgggtccgacagtgaacacgatgtggagtgcatgg
gtgatggagcaacggacggcacaggctgccgccctgcctggggtgctgagcagcacgaac
ccgaaggtgtggacggtggctcagtcggtgctgtacgcctcaccgagtctcctccgttcc
gtagaggcgctgcaccagctcttcagccccatcttcgtggtcgacttggccttttgtgtc
gtgctgatgcacaagtcgaaccttatttcactgctcctgtcgcgtgagacatccacagat
gcacatgcagggcagccggaggacgtcgcgacagattcgggggccggaagcagtgtctct
ccaatgaagctgattgatgctcttggacaactcgacgcgctcttggcagtgccggagaac
gcagggtacagaccctttctgcaagatgtcttcacctctctgccgccctccatcttgcac
gccattgcgccaccagtgtctccttgtgccggtgttgtcgcatcttcttctcgaaatgat
gcaacttcgacaggtgcgacggagtag
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