Leishmania panamensis: LPMP_330160
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Entry
LPMP_330160 CDS
T06539
Name
(RefSeq) trans-splicing factor, putative
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lpan
Leishmania panamensis
Pathway
lpan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LPMP_330160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpan03041
]
LPMP_330160
Spliceosome [BR:
lpan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
LPMP_330160
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Gene cluster
GFIT
Motif
Pfam:
Nop
DUF7339
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
22578169
NCBI-ProteinID:
XP_010702109
UniProt:
A0A088RZ84
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Position
33:complement(31592..32617)
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AA seq
341 aa
AA seq
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MDEGFDAHVTAATLEEIPAYEENEVTLLSDDDALRYDSVTEVTKLLRSSYLSGMLRRLSD
YEQTIGRGKNSIPSDDPEYQYVSDCSSLVLRIEVEKSRVHVFLRAQYSIRFPELDMFFSD
SVLYAKVVKVIQNNVDFSSVVTQLDELLPSQLLVVVVACASTTSGRDLSPEELSRVLEAC
EELENLEMAKQTFLEYIQCSMPLICPNLCAFLGTGITSQLFAISGSVAKLSIMDPTDLAR
LGSRRSNDSGIAIKTTGFLSNCDLVANLPPQLRPKALRLVASVTLTLARIDANRRAPTNY
EGVRERRLTCNRMRAWLDPPVLRGAGHNMYERRGRKRRRAN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggttttgatgcgcatgtgacggctgccacgcttgaagagatcccggcgtac
gaggagaacgaagtgacgctgctcagcgacgatgatgcacttcggtacgatagcgttacg
gaggtcacgaagttactccgctcgtcttacctgagcgggatgctacgtaggttgagtgac
tacgagcagacgatcggccgcggcaagaactccattccatcagacgatcccgagtaccag
tacgtgtcggactgcagctcgctggtgctgcgcatcgaagtggagaagagtcgtgtgcac
gtctttctgcgcgcccagtacagcatacgcttcccggagctcgacatgttcttctcagac
agtgttctttacgccaaggtggtcaaagtaatccaaaacaacgttgatttcagttccgtc
gtgacccagttggacgagcttctcccatcccagctgctggtggtggtggtggcgtgcgcc
tccacgacgtctggtcgagatttgtctccggaggagctgagtcgtgtattggaggcatgc
gaagagctcgagaacctcgagatggcgaaacaaacattcctcgaatatatccagtgctcg
atgccgctcatctgccccaacctctgcgcattcctcggcactggtatcacgtcgcagctc
ttcgccatatcggggagcgtagccaagctgtcgataatggaccccaccgatctggcgagg
ctcggcagtcgacgctcaaacgacagcggcatcgccataaagacaactggattccttagt
aactgtgacctggtggcgaacttgccaccccagcttcggcctaaagcactgcgcttggtt
gcgagcgtgacactgacgctagcgagaattgatgcgaaccggcgcgcaccaaccaactac
gaaggggttcgtgagcgccggctaacgtgtaaccggatgcgtgcttggctggatccaccg
gtgctgcgtggcgccggtcacaacatgtacgagcgccgcggccgaaagcgtcgacgcgcg
aactag
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