KEGG   Leishmania panamensis: LPMP_330320
Entry
LPMP_330320       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
lpan  Leishmania panamensis
Pathway
lpan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    LPMP_330320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_330320
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     LPMP_330320
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WDR55 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin CSTF1_dimer Beta-prop_RIC1_2nd Cytochrom_D1 LAL_C2 Beta-prop_VPS8 GNAT_acetyltran
Other DBs
NCBI-GeneID: 22578185
NCBI-ProteinID: XP_010702125
UniProt: A0A088S195
LinkDB
Position
33:complement(<87756..>89291)
AA seq 511 aa
MAGGAQPHRKRPRQGVLVDPLSREIYQMVVRQLHHDGFLAAASAVCDATGVVVGNVEDQG
DRLARVVAAGLSVNEMERRAEEEFHSTQVVERFLSASKLYMPLSLSSRWSVGRRCLRMRE
RFMSASLGGVVRDISFSPDGAYVTCAGTNGLAAIFSLETIEDLSALDEARAANRARALDG
SRDAGSFANGETAPKGSALRNANEVTELAMVRRFHEHTQSVEVMRFHPTKPIVLSGGRDG
NLYLRNYAYPDSRVVLKIHDTVPIRDASFHPSGEYIVLAANHHLPRLINVQTEKVLTPPG
TYASSTAHTGPQWEAEESGTATTSYRPSDRGAQHSAALSSVCFSPDGRTMISTSLDGTWM
LYDGVSGRVIYRAENAHSGVPVTSVVYSRTGNVALTAGMDSTARLWDLRRLHATSRNYQS
PEVTSFGEPTKCDHRSIRAVFSANEGHVHCHDSTLLAVHSYCVYTGVVTSTVTTQPSFMQ
RGLAASPWANCIVTGGDDSRLRMWTPAWLPS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctggcggtgcgcaacctcaccgcaagcgcccccgacaaggtgttctcgtagatccc
ctctctcgtgagatttatcagatggtggtgcgccaacttcaccacgacgggtttctggcc
gctgcttccgccgtttgcgatgccactggggtcgtggtgggtaatgtggaggaccaaggc
gaccgcctcgcgcgcgtcgtggcggcgggactaagtgtcaatgagatggagcggcgtgca
gaggaggagtttcactccacgcaggtggtggagcgttttctgagcgcgtcaaagttgtat
atgccgttgtcactatccagccgctggtcggtgggacgtcgatgcctgcgcatgcgagag
cgcttcatgtcagcttctctcggcggcgttgtgcgagacatctccttctctccggatggc
gcctacgtcacatgtgctggcactaacggacttgcggccatattttcactggagacaatt
gaagatttaagcgcgcttgacgaggcgcgcgccgcgaaccgcgcgagagcgctcgatggc
agtcgtgatgctgggagtttcgccaatggtgagacggctcctaaagggtccgctctccgc
aatgccaacgaggtgacagagcttgcgatggtgcgccggtttcacgaacacacccagtct
gtcgaggtgatgcgcttccaccccaccaaaccgattgtgctatcgggcgggcgcgacggc
aatctgtacttgcgcaactacgcctatcctgattccagggtagtgctaaagattcacgac
accgtccccattcgcgatgcttcgtttcatccgtctggcgagtacatcgttctggcagcg
aatcaccatcttcctcgattgatcaatgtgcagaccgaaaaggtgctcacgccccctggc
acctacgcgtcctcgactgcccacacagggccgcagtgggaggccgaggagagcggcact
gcgactacctcgtaccgaccaagcgatcgtggggctcagcacagtgcagcgctgtcctcg
gtatgcttctctcctgacgggcgaacgatgatcagcacaagtcttgatggtacctggatg
ctttacgacggcgtgagcggtcgcgtgatttaccgcgctgagaatgcgcactctggcgtg
cctgtcacgagcgtcgtgtacagccgaactggaaatgttgcactgacagcgggtatggac
tcaacagcgcgcctgtgggaccttcggcgactccatgcaacatcgcgcaactaccagagc
ccagaggtaacctctttcggtgagcccaccaagtgtgatcatcggagcatacgcgccgtg
ttctccgccaacgagggccacgtgcactgccacgattctactcttctcgctgtgcacagc
tactgtgtctacactggagtagtaacctccaccgtgacaacgcagccgagttttatgcaa
aggggtcttgctgccagcccgtgggccaactgtattgtaacaggcggcgatgacagccga
ctgcgtatgtggacaccggcgtggcttccatcttga

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