Leishmania panamensis: LPMP_330420
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Entry
LPMP_330420 CDS
T06539
Name
(RefSeq) DNA mismatch repair protein, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
lpan
Leishmania panamensis
Pathway
lpan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPMP_330420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_330420
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LPMP_330420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
Ribosomal_S27
Exo70_N
Motif
Other DBs
NCBI-GeneID:
22578195
NCBI-ProteinID:
XP_010702135
UniProt:
A0A088S1A2
LinkDB
All DBs
Position
33:complement(137760..140582)
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AA seq
940 aa
AA seq
DB search
MADERDGSVVQAFLALGEDTSKHFRMFSRGSNPGCYVLGWWATFVAKEYIKSTAVLKQWP
AGGRSSSGTIDVVVVNDALCKEVIRDCLLRRGVSVEYYDRETPGGPYVCRQRGSPGNITD
FEASLFEFEETEIQLLASGSLVFGAKQDTQPKIGFAALNNTLRQLSFAEYTDTPQLTSLD
ALVAQTNLKELLLCVMSPTASAGGETNLDDDDRITAVRRICERCGVQLSVRTLREVQQLQ
TREASAKGIEALAEILRVPEERLPLELCPIARHAVENILSRIDVMDPSNQRAFYLRRIVP
STYVKLDSAAIEALNLVSKKPEPRGSLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCVDD
INQRLTMVELFVENPILRDMFTAQVLKRCGDMDRLNRKLQRRSLALKETQAFLEFVAVVP
AALQTLSSYTGPQSKLLKDEFIAPMEDINEHMKNLKTLIEATVDFSDRNAVRMNATFDDE
LQDLHEQLTATQRQIEKEYSHVLSKYGWNEKQLKYEYHGTYGYVFRVSRKEDRQLRSAKE
LITVSTSKDGVRFVSEKMAVLSEQYRRVSGDYETRQMDLKRKLVDTIASYLPVLDDAKEL
IATLDVYVAWALVVRDCPRPMVRPVLREAPEPVTLVKQEGAVVRSADSAPLLSFKGLRHP
LVELRLPSYKANSLHLTTHTNGLLITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEV
QVRDAVMCRVGATDHLAQGVSTFMVEMLESAAIISGATSETLAIVDELGRGTSTYDGFGL
AWAIAQDVAARVRATLLFSSHFHELTQLPQQCGALQNVHFGAEVDEAAGTLRFSYTLQPG
PCGRSYGLYVASLAHLPESVIECAKVKAAEWETFEKEDVAKCSAGATPDEAVARKVSAYA
KRIRALEQQGSSDNHDKAAKQLRLEIQQDADVRPYLCKVA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaacgcgacggtagcgtcgtacaggccttcctggccctcggggaagacact
agcaaacactttcgcatgttctccagaggctccaacccgggatgctacgtgctgggctgg
tgggccacctttgtagctaaggagtacatcaagtccaccgctgtgctgaagcagtggccc
gctggcggccgctcctcctcgggtacgatcgatgttgtcgtcgtgaatgacgcactctgc
aaggaggttatccgtgactgcctgctgcggcgcggagtgtcggtcgagtactacgaccga
gagacccccggcgggccgtacgtgtgccggcagcgcggctcaccggggaatatcaccgac
ttcgaggcatcgctttttgagtttgaggagacagagattcagctgctggcgagcggctcc
cttgtattcggcgcgaaacaggacactcagccaaagattggctttgcagcgctgaataac
acgctacgacagctgagctttgctgagtacacggacactccgcagctcaccagcctggac
gcgctcgtcgcacagacaaacttgaaggagcttcttttgtgtgtgatgtcgcccaccgct
tctgccggcggcgaaacaaacttggacgacgatgaccgtatcaccgcagtgcgccgtatc
tgtgagcggtgcggtgtgcaactgagcgtgcgcaccctgcgtgaggttcagcagctgcag
acgagagaagcctctgcgaagggaatcgaggcactggcagagatcctgcgagttccagag
gagcgactgccgttagagttatgcccgattgcgcgacacgctgtggagaacatcctcagt
cgcatcgatgtgatggacccgtcgaatcagcgcgccttctacttgcgccgcatcgtgccg
tccacgtatgtgaagctggacagcgcggcgatcgaagcgctgaacctggtgagcaagaag
ccggagccgcgcggctcccttccgacgtctgtgttctcgtggctgaatcgttgtcacacc
ggcatgggcgcgcgtgcgatgcggcagtggctgctgcagccgctccgttgcgtcgacgac
atcaaccagcgcctcaccatggtggaactcttcgtggagaaccccattctgcgcgacatg
tttacggcccaggtgctgaaacggtgtggcgacatggatcgacttaatcgcaaactgcag
cggcgcagcctcgctcttaaggagacgcaggcgtttctggagtttgtcgcggttgtccct
gccgcgctacagactctgagctcctacacaggtccacagtcgaagctcttgaaagatgag
ttcattgccccgatggaggacatcaacgagcacatgaaaaacctgaagacgttgatcgag
gcaaccgtggacttcagtgaccgcaatgccgtccgcatgaacgccaccttcgacgacgag
ctgcaggacctgcacgagcaactcacagccacgcagcggcagatcgagaaggaatacagc
cacgtcctgagcaagtacgggtggaatgagaagcagctcaagtacgagtaccacggcacg
tatggttacgtcttccgtgtctctcgcaaggaggatcgccagctgcgcagcgcaaaggag
ctgattacggtaagcacgtccaaggacggcgtgcggtttgtgtcggagaagatggcggtc
ctcagcgagcagtaccggcgcgtcagcggcgactacgagacgcggcagatggacctcaag
cgcaagctagtggataccatcgcctcttacctgcccgtgctcgacgacgccaaggagctg
atagcaactctggacgtttacgtagcctgggctctcgtagtgagggattgtccgcgtccg
atggtgcggccagttttacgcgaggccccggagcctgtaacgctagtgaagcaggagggg
gcagtcgtgcgcagcgcagactcggcgccgcttctctctttcaagggacttcggcatcct
ttggtagagttgcgccttccgagttacaaggccaactctctccatctcaccacgcacacg
aacgggctgctcattactggacccaacatgggcggcaagtccacatacatgcgcagtgtc
ggcgtcgctgtggtgctggcgcaggcaggctgttttgtgcccgccgatgcggcggaagtg
caggtgcgcgacgctgttatgtgccgagtcggcgcgaccgatcatctggcgcagggcgtc
tcaacctttatggtggagatgctcgagtctgctgcgattatctctggtgcgacgtcggaa
accctcgccatcgtcgacgagctcggccgtggcacgtccacgtacgacggcttcgggttg
gcgtgggcgattgcccaggacgtggcggcgcgtgttcgcgccactctcttgttttctagc
cactttcacgagctgacgcagctcccgcagcagtgtggcgctctgcagaacgtgcacttt
ggcgccgaggtcgacgaggcagctgggacgctgcgcttctcctacaccctccagccaggg
ccgtgcggacgcagctacggcctgtacgtcgcctcattggcgcacctgccagagtcggtg
attgagtgcgccaaggtgaaggccgccgagtgggaaacctttgaaaaagaggatgtcgca
aagtgcagtgctggagcaacgcctgacgaggcggtagcgcggaaggtttcagcgtacgcc
aagcgcatccgtgcgctggagcagcagggatccagcgacaatcacgacaaagcggcgaag
cagctaaggctagagatccagcaggacgcagatgtgcgtccgtatctctgcaaagtggcg
tag
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integrated database retrieval system
