Leishmania panamensis: LPMP_333320
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Entry
LPMP_333320 CDS
T06539
Name
(RefSeq) beta prime cop protein, putative
KO
K17302
coatomer subunit beta'
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpan04131
]
LPMP_333320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpan04147
]
LPMP_333320
Membrane trafficking [BR:
lpan04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
LPMP_333320
Exosome [BR:
lpan04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
LPMP_333320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40_Prp19
WD40
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Clathrin
Beta-prop_SPT8
TPR_8
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
22578485
NCBI-ProteinID:
XP_010702420
UniProt:
A0A088S248
LinkDB
All DBs
Position
33:1390727..1393441
Genome browser
AA seq
904 aa
AA seq
DB search
MSAGTMATVEFTAPSQRVKMVDMHPKEPIFIAALYSGGINLYNYQTQALVRSFDTGTGLP
VRCVRFIPRLQSFVCGCDDMNVRVFNYHTMERTKIFQAHDDYIRCVAVHDQLPLVLTCAD
DMTIRQWDWSKGWTLQITYEGHQHFCMAIAFNPKDSSAFASASMDCTIKVWRINTPIPNY
QLEGHEDGVNCVEFYPRGDKPYLLSGSDDRTVRLWDYQTKACLQVFSFHDENVASVLFHP
DLPVIYSISESDHIAAFSTETFRLLYSCSHSDMGRGWSLTAKRYTNMLIAGFDNGVRAYK
VGVDKPVFSMDANGRVLVVTGNEIMRMDIKAVGSETPDGEVLSVATKDMGAVEATARSIF
HAGNGQFICVLGDDNYTIISALSLRPKSYGQCISFVWGPESGAYAVLESSTTLKIFKSFK
GRAVLSLPAVADKLFGGPLLAVRTNNSIMFYDWGTLALIRQIDETPMTLEWNATGGLVAL
VTSSGVFLLKFNGDAVAQYLEQNATTSDDGLDFSFDLVEELDEKARDVAWVGDCLVYINQ
VHRLNYYIGGEVNNIAVLNRNQYLLGYLPKENRFFCIDKEKNITSYRFEVNVMEYMAAIV
REDFDAANALLPTIDVSLRDKLSRFVESRGLLEIALEIATDDEHRFDLAVQLKQLSLACE
IASKANVASHWKQVGDIALEQGYFDMAIESLEKCNDWSGLLLIYKSLNDMQAISRLGDCC
LQSEQANLAFTCYHLTQRHAECVELLQKTGKMGDAAFYARTYCPNLIEDAVAKWRASVAS
IPRVSQALANPAAYPNLFPSLRYADLSSRKEPKADVPLSMSEPAKVVADIDSARDHTPLR
GQLAAEILPQPMHTPMEASQSSVVSPPPPSFQAIGVATTDAAPVHDTVGSVSNEIQELVD
ESGA
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgggaccatggccacggtggagttcaccgcccccagccagcgcgtgaagatg
gtggacatgcaccccaaagagcccatcttcattgcagctttgtattctggcggcatcaat
ttgtacaactaccagacgcaggcgctcgtccgctcctttgacacaggcacgggtcttcca
gtgcgctgcgttcgttttattcctcgcctgcagagttttgtgtgcggctgtgatgacatg
aacgtacgtgtgttcaactaccacacaatggagcggacgaagatattccaggctcacgac
gactacatccgctgtgtcgctgttcacgaccagctgccgctggtgctcacgtgcgcggat
gacatgactatccgacagtgggactggagcaagggatggacgctacagatcacctacgag
ggacaccagcacttctgcatggccattgcctttaacccgaaggactcttccgcgttcgcc
tccgcctcgatggactgcaccatcaaggtatggcgcatcaacacgccgatacctaactat
caactagaaggccacgaggatggtgtcaactgcgtcgagttttatccgcgtggcgacaag
ccctacctgttgagtgggtccgacgacaggacagtgcggttgtgggactaccagaccaaa
gcgtgtctgcaggtcttctccttccacgacgaaaacgtcgcaagtgtgcttttccacccg
gacctgccggtcatctactccatctccgagtcagaccacatcgccgccttctccaccgag
acgtttcgcctgctgtactcgtgcagccactcggacatgggacgtggatggtcgctgacc
gcgaagcgctacacaaatatgctgattgccggctttgacaatggcgtgcgggcctacaaa
gtgggtgtggacaagcccgtcttctctatggacgccaacggtcgggtcctcgttgtgacc
ggaaacgagatcatgcgcatggacatcaaggccgtggggtcggagacccccgacggcgag
gtgctgagtgttgcgacgaaggacatgggtgccgtcgaggcgactgctcgctccattttt
cacgctggaaatggccagttcatttgtgttctcggcgacgacaactacaccatcatatcg
gccctctcgctgcgtcccaagtcgtacgggcagtgtatatcatttgtctggggccctgag
agcggcgcctacgccgtgctggagagttcgacgacgctgaagattttcaagagcttcaaa
gggcgtgccgttctgtcgctgccggcggtggccgataagctgtttggtggaccactgctg
gcagtgcgcacgaacaacagcatcatgttctacgactggggcacgctggcgctgatccgg
cagatcgacgagactccgatgacgctcgagtggaacgcgacgggtgggctcgtggcgctc
gtcacgagcagcggtgtcttcctcctcaagttcaatggggacgctgtcgcgcaatacctc
gagcagaacgccaccaccagcgacgatggtctcgacttctccttcgaccttgtggaggag
ttggatgagaaggcgcgcgatgtggcgtgggtgggagactgccttgtatacatcaatcag
gtgcatcgtctcaactactatattggtggcgaggtaaacaacatcgctgtgctgaaccgt
aaccagtacctcctcggctacctaccaaaggaaaatcgtttcttctgcatcgacaaggaa
aagaacattacgagctatcgctttgaggtgaacgtcatggagtacatggccgccatcgtt
cgagaggactttgatgccgccaatgcacttctccccacgatcgatgtgagcctacgtgac
aagctgtcgcggtttgtggaatcgcgggggctgctggagatcgcgctcgagatcgccacc
gatgacgagcaccgcttcgatctggcggttcagctaaagcagctgtccttggcttgcgag
atcgccagcaaggcgaacgttgcctcgcactggaagcaggtgggcgacattgcacttgag
caaggctacttcgacatggcgatcgagtctctggagaagtgcaacgactggagcggactg
ctgctcatctacaagtctctcaatgacatgcaggccatctcgcgcctcggtgactgctgt
ctgcaaagcgaacaagccaacctggccttcacctgctaccacctcacccaacgtcacgca
gagtgcgtagaactgctgcaaaagaccggcaagatgggtgacgccgctttctacgcccgc
acctactgcccgaacctcatcgaggatgctgtggccaagtggagggcatcggtggcctcg
attcctcgcgtgagccaagcgttagccaacccggcggcctacccgaacctgttcccatca
ctgcgctatgccgacttatcctcccgaaaggaacccaaggctgacgtcccgctgtccatg
tcagagccggcgaaggtggtcgccgacatcgactctgcacgggaccacacccctctgcgc
ggccagctggcggcggagatactcccgcagccgatgcacacgccgatggaagcgtcgcag
tcttctgtagtatcgccaccgccgccaagctttcaagcgataggagtcgccacgaccgac
gcggccccagttcacgataccgtaggcagcgtgtccaatgagatacaggaactggtggac
gagagcggcgcttaa
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