Leishmania panamensis: LPMP_343100
Help
Entry
LPMP_343100 CDS
T06539
Name
(RefSeq) replication factor C, subunit 3, putative
KO
K10756
replication factor C subunit 3/5
Organism
lpan
Leishmania panamensis
Pathway
lpan03030
DNA replication
lpan03410
Base excision repair
lpan03420
Nucleotide excision repair
lpan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPMP_343100
03410 Base excision repair
LPMP_343100
03420 Nucleotide excision repair
LPMP_343100
03430 Mismatch repair
LPMP_343100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpan03032
]
LPMP_343100
03036 Chromosome and associated proteins [BR:
lpan03036
]
LPMP_343100
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_343100
DNA replication proteins [BR:
lpan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LPMP_343100
DNA Replication Termination Factors
ELG1-RFC complex
LPMP_343100
Chromosome and associated proteins [BR:
lpan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LPMP_343100
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LPMP_343100
Check point factors
HRAD17(Rad24)-RFC complex
LPMP_343100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
Rad17
DNA_pol3_delta2
AAA_30
AAA_19
AAA_16
AAA_22
Mg_chelatase
AAA_11
AAA_5
TniB
AAA_14
AAA_24
RuvB_N
ATPase_2
DEAD
AAA_assoc_2
RCF1-5-like_lid
AAA_29
NB-ARC
AAA_3
nSTAND3
DUF815
AAA_23
AAA_7
AAA_2
AAA_33
SLFN-g3_helicase
ABC_tran
NPHP3_N
bpMoxR
MeaB
FtsK_SpoIIIE
Sigma54_activat
AAA_28
T2SSE
TsaE
RNA_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
22578815
NCBI-ProteinID:
XP_010702736
UniProt:
A0A088S140
LinkDB
All DBs
Position
34:complement(1213011..1214105)
Genome browser
AA seq
364 aa
AA seq
DB search
MYAGRQGEEGKVAASHLPWVEKYRPSTLESVVAHEDILSTLRHLMNSGNMPHLLLYGPPG
TGKTTTIKACAYYLYGKDRVRANVLEMNASDDRGIDVVRQQTREFASTTSIFSVMGSSSS
TGSGSGGSAVKFKLVILDEADQMSHDAQAALRRVIEKYTRNVRFCLLCNHINKIIPALQS
RCTRFRFAPVKKSAMMPRLRYVAEHEGVKYTTDGLAAAYRLSQGDLRRCLNTMQASALSA
NEITEESVYRVTGNPTPADVTTIVSHMLSSDFATSWIKTEEAVTQKGISMADLTREIHPV
VMAMDLPQDCKCFLLMKLSDLEYYAAGGARESAGLGGLLGAFQLVKETVVQRKPIKDVAG
DCAF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaggcaggcaaggtgaggagggcaaggtggctgccagccatctgccatgggtg
gagaagtaccgtcctagcacactggagagcgtcgtcgcacacgaggacattctcagcacg
ttacggcatctcatgaatagcggtaatatgcctcacctgctgctctacggtccgcctggt
accggtaagacgaccaccattaaggcatgtgcgtactatctctacggtaaggatcgagtg
cgcgcgaacgtgcttgagatgaacgcgtccgatgaccgtggcatcgacgtggtgcgccag
cagactcgcgagttcgctagcaccacttccatattttccgtaatgggctccagcagctca
actggaagcggaagcggtggctcggcggtaaagtttaagcttgtgatcctcgacgaggca
gatcagatgtcccacgatgcccaggcggcgctgcgtcgcgttatcgagaagtacacgcgc
aacgtgcgcttttgtctcctctgcaaccacatcaacaaaatcattcccgctctgcagtct
cggtgcactcgcttccgcttcgcaccagtgaagaagtcggcgatgatgccgcgcctccgg
tacgttgcagagcacgaaggcgtcaagtatacgacggacgggctggcggccgcgtaccgc
ctcagccaaggcgatttgcgccggtgcctcaacaccatgcaggcctcggctctctctgca
aatgagattacggaagagtctgtctaccgagtcaccgggaacccgacccctgcggacgtg
acgacgatcgtgtcgcacatgctttctagcgacttcgcgacaagctggatcaagacagag
gaggctgttacgcagaaaggtatctccatggcggacttgactcgcgagatccatcccgtc
gtgatggccatggacttgccgcaggactgcaagtgttttctgctcatgaagctttcggac
ctcgagtactacgcggccggaggggcgcgtgagtcggctggccttggtgggctgctgggg
gcctttcagcttgtcaaggagaccgttgtgcagcgcaagccaatcaaggatgtggccgga
gactgcgcgttctaa
DBGET
integrated database retrieval system
