Leishmania panamensis: LPMP_343750
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Entry
LPMP_343750 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpan03009
]
LPMP_343750
04121 Ubiquitin system [BR:
lpan04121
]
LPMP_343750
Ribosome biogenesis [BR:
lpan03009
]
Eukaryotic type
90S particles
Other 90S particles
LPMP_343750
Ubiquitin system [BR:
lpan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
LPMP_343750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Sof1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_Vps41
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_IP5PC_F
eIF2A
Beta-prop_NUP159_NUP214
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
22578880
NCBI-ProteinID:
XP_010702798
UniProt:
A0A088S0R9
LinkDB
All DBs
Position
34:complement(1413389..1414723)
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AA seq
444 aa
AA seq
DB search
MVKIKAISRSELEWTKDRATEVPKANRNYDPKFNPMAKQVEFTRAVVAAKMDRMFAKPFV
AALPGHQDTIQSIATDITSLSTVATGSVDGGLIVWDMMTRRQRAVIDAHRHSVDGVTISP
DGVACFSASRDKTVKMWDLDFDPDEARIEPVTEFLGEFPFSSIDHHFHKSWFATSSDVVN
IWDVNRTQPLQRFSWGDDTVSSCRFNKIETNLVACCMADRGVFLYDIRSQSAHSKIVMEM
CSTSLSWNPMDPNTFVTGSDDRNCYLFDIRVPGRPRNVFQGHIRPVTSVDFSPTGTMFAA
GSQDASLRIWDLHQTTKSDSMEMFHTKRMAGVYVVKWSPDNTYIYSGSEDAVLRVWKSDA
SKPIRPLRGPEQHKFNYMRSLKNRYSNFVEVKRINNQRNAPKAILRTSRRIKKAEKREAV
KEMSRIHSNNVKPLAKRKTYGYVE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagatcaaggcaatcagccgctccgagctggagtggacaaaggatcgcgcgaca
gaggtgccgaaggccaatcgaaattacgatccgaagtttaatccaatggcaaaacaggta
gagttcactcgcgcggtggttgctgccaaaatggaccgcatgttcgcgaagccttttgtg
gctgcgctcccgggtcatcaggatacgattcagtctattgctactgacattacaagtcta
tccactgtggccacgggctctgttgacggtggactaatagtgtgggatatgatgacgcgg
aggcagcgtgcggtcatcgatgcacatcgacactctgtcgacggtgtaactatctcacca
gacggtgtcgcttgctttagtgcttcacgtgacaaaactgtaaagatgtgggatttggac
tttgaccctgatgaagcgcgtattgagccagtgacagagtttctgggtgagtttcccttt
tcctctatcgatcaccatttccacaaatcatggttcgccacgtcgtcagacgtggtgaac
atctgggatgtcaaccgcacacagccgctccagcgattttcttggggtgacgacacagtg
tcttcctgccgatttaacaagattgaaacgaatctagttgcatgctgcatggcggatcgc
ggcgtcttcctttacgatattcgcagtcagtccgcccacagcaagattgtgatggagatg
tgctcaacatcattatcatggaacccaatggacccgaacacgtttgtgacgggaagtgac
gatcgaaactgctacttgtttgacattcgcgtgcccggacgtccacgtaacgtctttcag
ggtcacatccgtcctgtcacatctgtcgacttttctcccactggcaccatgtttgctgcc
ggatcacaagatgcctcattgcgcatttgggacttgcaccagacaaccaagtccgactcg
atggagatgtttcacacgaagcggatggctggcgtgtacgtagtgaagtggtctcccgac
aacacctacatttacagcgggagcgaagatgcggtgcttcgtgtgtggaagtccgacgct
agcaagcctattcgcccactacgcggcccagagcagcacaagttcaattatatgcgctct
ttgaagaataggtactctaactttgtcgaggtgaagcgaattaacaaccagcgcaacgca
cccaaggcgattctgcgaacttcacgccgtatcaagaaggccgagaagcgcgaggcagtg
aaggagatgtcacgcattcatagcaacaacgtgaaaccgctggcaaaacgcaagacctac
ggctacgtggagtag
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