KEGG   Leishmania panamensis: LPMP_344230
Entry
LPMP_344230       CDS       T06539                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit, putative
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lpan  Leishmania panamensis
Pathway
lpan03030  DNA replication
lpan03410  Base excision repair
lpan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPMP_344230
   03410 Base excision repair
    LPMP_344230
   03420 Nucleotide excision repair
    LPMP_344230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpan03032]
    LPMP_344230
   03400 DNA repair and recombination proteins [BR:lpan03400]
    LPMP_344230
Enzymes [BR:lpan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LPMP_344230
DNA replication proteins [BR:lpan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    LPMP_344230
DNA repair and recombination proteins [BR:lpan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      LPMP_344230
SSDB
Motif
Pfam: POL2_thumb DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 zf-DPOE YopE_N
Other DBs
NCBI-GeneID: 22578928
NCBI-ProteinID: XP_010702845
UniProt: A0A088S372
LinkDB
Position
34:1601165..1608085
AA seq 2306 aa
MATRLESGTRVGWLFNYHPTTEVLQEDEDAIAGEGAQRAALVLLFQDLSGDTFCVHLHFD
PYILVQAVEGHEREVELGLMSTFGPQIISRIVAVEREDLDLVNHLSGKKRVYLKVVFRNV
QDLTTLRGQVEKIVKLNASLSSENPLRNQFSGSLSDAMAKPFVEDSLYSAAGSSRWMDWV
QDIREYDVKYYMRVAIDMKVYCGLWYDVTVMEGEARVERCDDSRYAPAMPRVIAFDIETT
KAPLRFPQPEVDEVYMISYMLDGRGYLIVNREIVTEDIAPFEYTPKPEYEGFFDTFNEEN
EAATLRRFFDEMRKYKPNVYVTYNGDYFDFPFLHARALHHGMHMHKEIGFTQMVDGAFLN
QQIPHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYS
VSDALSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNK
KEIVRERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMTFDMNPDTYQSLMDDVDEALRF
ALEVENGVKVEEVTNLEEVRAAVLAKLTNLRNRPHQQEKPFIYHLDVGAMYPNIILTNRL
QPYAIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENESFAAG
VIEQANLAAVQKKAYGNRKGNVLEGTLYERKDDWRKNQRNRNSSSSGGGGYRQESRRQQR
EAADALLQREFGADRNGVSGDSDSDDDVDGPKAYHKLTENTQFNMLKRRLSEYSRKAYGK
IHETREVMQSNVVCQRENSFYVDTVRLFRDRRYEYKAALKSWKKKLDATKDADERKLCQS
RCVQMESLQLAHKCILNSFYGYVMRKGSRWSSMEMAGIVTYLGATLIQMARSLVQQIGVT
LELDTDGIWCCLPNTFPENFTFTTRNASKPQISISYPCVVLNKMVHDRYTNHQYQNLVST
GVYRTHSECSIYFEVDGPYLAMLLPASREEGKSIKKRYAVFNPDGSLAELKGFELKRRGE
LMLVKDFQSQVFRRFLDGSTLADAYASAAVVANAALDMLVSKGEGYDTEEILEKITESSN
MTRRLSEYPESQKSLAITTARRIAEFLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVT
IFRADQAIRTHFLRKWTADTTVPSELNLKALLDWDYYIARFSACVQKIVSIPAALQSLPN
PVPRVAYPDWLEKRIRHSNSRYRQVSLRSMLSKVQSKSEGLGGKFSAAAAATTINVDEVE
DSAQGKQGGGADAGKGQLQDLEDMMGRTGSGIIRHAAAPQITEAVPAGEQRRATEVVPET
DWDEDDVECEGESDTDMQRIQREADAKMDALAHDVKQRYFAPKSTTTLDAEFFADLGTKQ
WLMQRKDTWLQRARLRKELALENDLSEIGPGGEDSGTVFSGVASAPDVTGVNSHFIDLKS
RALATVWNVLEVRENEESPGILQVLAALGHSLHSFRVQVRRTVIVDADPALSLEALDAAE
VSGRVLPRRAAAGRVYQVDVPPGEEGERRLNELHVMESVHQIYEEHRSRVDTFVEQLGCC
VSVDSVRHLHNARRRPPSQREIFGIDEMNMHAHTNYLSCGATGRAVFVFHAVTEQRGLIA
VVSPQTNTALVVFIQPAEATKPVINWGIICEESAKRLHTTTPEPIQVTSEVAVDQRAAWR
QVYQHLSAALESTKAPLLAVLQSCLPTSTLLQQRSLPVGLPYLRILGAAEDERLLSDPFR
WTRLLARRLFERFFASLLWVEERLALSRISGIPLCNIAQDSCVHVLDVLYIRALHRRSHV
LWCSSDPLITFDTVEERPREVCMAGGYASWCVEFGLSRLDVVALLFSQTIEEGDDQNARV
LSDRGVSTHFNILRDLVADVLGQAVDNILADTLLNNVARWLRNPLSSCYEPRLVELLSSL
AHRALTGILLRLAKLGGRTVKVDGSSVTVLTSKYSLQEAVSFASFLTASLQDQPMLLLLS
LQPLRYWCPYIVLDPRDYAGLFIFAEDAIKFMKGEEPTRADLHVAHQLTMASRLPNRVRN
TLVARVVGTLYQLNETVHRVYCHTVADHTVTLATRHNQLTRRVLEDSQRLFEDVMQADIM
DEVQRMTDARDLYTEEEHTAHERGELTLWSSGAVGLEYAKCVCRVLELIPCNGAVGKVRN
NAMRLCGISPFSAQSQFQADPLLAHRLQPVTCSFCNSHISIDLLVRRKSAASPFTCPACA
APIAAVAMEGTLVRRVSQLLRVYTQQDFVCTKCREMITTYVGERCCGALVGKAAPVEGEL
RALQYLAKIQSFPWLAESVETALLCT
NT seq 6921 nt   +upstreamnt  +downstreamnt
atggcgacgcggctggaaagcgggacgagggtggggtggctgttcaactaccaccctacc
accgaagtgctgcaggaggatgaggacgctatcgccggcgagggggcgcaacgcgcggcg
ctcgtgctgctcttccaggacctctccggtgacaccttctgcgtgcaccttcacttcgat
ccgtacatcctcgtccaagctgtggagggccacgagcgtgaggtggaactcggcctcatg
tctaccttcggtccgcagatcatcagcagaatagttgcggtggagagagaggacctagac
ctcgtgaaccacctgagtggcaagaagcgcgtctacctcaaagtagtcttccgaaacgtg
caggacctcacgacgttgcgtgggcaagtagagaagatcgtcaaactcaacgcctctctc
agctccgagaaccctctgcggaaccagttcagcggctcgcttagcgatgccatggcgaag
ccgttcgtcgaagattccctttacagcgcagccggtagcagtcggtggatggactgggtg
caggacatacgcgagtacgatgtgaagtactacatgcgcgtcgccatcgacatgaaggta
tactgtggtctctggtacgacgtgacggtgatggagggtgaggcacgggttgagcggtgc
gacgatagccgctacgcaccagccatgccacgcgtcatcgccttcgacattgaaacgaca
aaggcgcctctgcgctttccgcaaccggaggtagatgaggtgtacatgatatcgtacatg
ctggacggccgtggctacctgatcgtcaaccgcgagatcgtcacggaggacatcgcaccg
ttcgagtacactcccaagcccgagtacgagggcttcttcgacaccttcaacgaggagaac
gaggcagcgacactgcgacgcttcttcgatgagatgcgcaagtacaagccgaacgtgtac
gtcacgtacaatggtgactactttgacttccccttcctccacgcccgcgcactgcaccac
ggcatgcatatgcacaaggagatcggctttacacaaatggttgacggggccttcttaaat
cagcagattcctcacctagattgcttctactgggtgaagcgagactcctacctgccgcag
ggaagccaaggcttgaaggcggttacaaagtacaagctgggctacgagccgattgaagtc
gatcccgaggatatgctccctctcgcgcaatcgcagccccagcgcatggcgtcgtactcg
gtgtccgacgccctgtcgacgtggtacctctatcagaagtatgtccaccccttcattttt
tccctcgccaccattatcccgatgccaccagacgatgtgctgcgcaagggctctggcggc
ctgtgcgagtcgctgctcatggtgcaagcggaggcgaacaacgtcgtgtttccaaacaag
aaggaaattgtgcgagagcgcttctacgagggccacttaatcgacacggagacgtacatt
ggcgggcgtgtggaggcgctgcgcagcggtgtgtaccgctctgatattcccatgacgttt
gacatgaatcctgacacctaccagagtctcatggacgatgttgacgaggcgctccgcttt
gctctcgaggtggagaacggtgtgaaggtggaggaggtaacgaacctggaggaggtaagg
gcggccgtgctcgccaagctgacgaacctgcgcaaccgaccgcaccagcaagagaagccg
ttcatctaccaccttgacgtcggagccatgtaccccaacatcatcctcacaaaccgcctg
cagccgtacgccattgcgcggccagacgtgtgtgccggatgctgcttcaattctccgaac
aacgaggcgcaatgcaagcgcgtcatgtcgtggaagtggagggccgagctcttcaccgcc
ggccgctacgagtttcagcgggtcaaggcccagctggagaacgagtccttcgctgccggc
gtgattgagcaggcgaacctcgcggcagtgcagaaaaaggcttacggcaatcgaaagggc
aatgtgctggagggcaccttgtacgagcggaaagacgactggcgaaagaaccagagaaat
cgcaacagcagcagcagcggcggcggcgggtaccggcaagagtcacggcggcagcagcgc
gaggccgccgacgcgcttctccagcgtgagtttggcgccgatcgcaacggcgtcagtggc
gactctgactcggacgatgacgttgacggtccaaaggcgtaccacaaacttacggagaac
acgcagttcaacatgctcaagcggcggctcagcgaatacagccgaaaggcctacggaaag
attcacgagacacgcgaagtgatgcagtccaacgtggtgtgccagcgcgaaaactccttc
tacgttgacacggtccgcctctttcgagaccgccgctacgaatacaaagctgcgctaaag
tcatggaaaaagaagctggacgccacgaaggacgcggatgaacgcaagttgtgccagagc
cgctgcgtgcagatggaatcgctgcagctggcgcacaaatgcatcctcaactcgttttac
ggctacgtgatgcggaagggctcgcgatggtcgagtatggagatggcaggtatcgtcaca
tacctcggtgcgacgctgattcagatggcccgctcgcttgtccagcagattggtgtaacg
ctcgagctcgacacggatggcatctggtgctgccttcccaataccttccctgagaacttt
acgtttaccacgagaaatgcgtccaagccgcagatatccatctcctatccgtgtgtggtg
ctgaacaaaatggtgcacgatcggtacacaaatcatcagtaccagaaccttgtcagcacg
ggtgtgtacaggacgcacagcgagtgctcgatttactttgaggtggatggtccgtacctc
gccatgttgctgcctgctagtcgcgaagaaggcaaaagcatcaagaagcgctacgccgtc
ttcaacccggacggcagcttggcagagctcaaagggtttgagctgaagcgccgcggggag
ctgatgcttgtcaaggacttccagtcgcaagtcttccgtcgcttcctcgacggcagcacg
ctcgcagacgcctacgcctcggcggctgtcgtagcgaatgctgcgcttgacatgctcgtg
tccaagggcgaaggctacgatacagaggagatcctggagaagattacggagagcagcaac
atgacgcggcggctctccgagtaccccgaatcgcagaagtctctggccatcacgacggcg
cggcgcattgccgagtttctgggaccccaaatggtgaaggataaaggcctggcgtgccac
ttcatcatctcgcgcatgccggccggccgccctgtcacagagcgagcgattcccgtcact
attttccgcgcggaccaggccattcgcacccactttctgcgcaagtggaccgccgacacg
acggttccgtccgagctgaatttgaaggcactgctggactgggactattacattgcgcgc
tttagtgcctgcgtgcagaagatcgtctctatcccggcagcgctacagtcactgccaaat
ccagtgccacgcgtggcgtatccggactggctggagaagcgcattcggcacagtaactcc
cgttaccgccaagtctcacttcgcagcatgctgtccaaggtgcaaagcaagagcgaggga
ctgggtggcaagttctcagcggcggccgctgccactacaatcaatgtggatgaggtggaa
gattcggcgcaggggaagcagggcggtggcgcagacgcaggaaaaggacaactgcaggac
ttggaggatatgatgggcagaacaggcagtggtattatacgccacgcggcggcaccacag
ataactgaagctgtccctgctggtgaacagcggcgtgccacagaggtggtccctgaaacg
gactgggatgaagacgacgtggaatgtgaaggggagtcagacaccgacatgcagcggatc
cagcgcgaggcggatgccaagatggatgcactggcgcatgatgtgaagcagcgctacttt
gcgccaaagagcaccaccacgcttgacgcagagttttttgccgaccttggcacaaagcag
tggctgatgcagcgaaaagacacgtggctgcaacgagctcgcctacgcaaggagctggcc
ctcgagaacgacctaagcgagatcggcccaggtggggaggacagtggcacagtgttttcc
ggggtagcctctgcgcccgatgtcactggcgtgaacagtcacttcattgacctcaagtca
cgcgcactggcaaccgtgtggaatgttctcgaggtgcgcgagaatgaggagagcccggga
attttgcaggtgcttgcagcgctgggtcacagtctgcactcctttcgcgtgcaagtgcgt
cgtacagtcattgtcgatgcggacccggcgctgagcctggaggcgttggacgccgctgag
gtcagcggccgcgttctgccgcggcgtgctgcggcgggtcgcgtctaccaggtcgatgtc
ccacctggcgaagagggagagcggcgcctcaatgagctgcacgtgatggagagcgttcac
cagatctatgaggagcaccgctctcgcgtggacacgtttgtcgaacagctcggttgctgt
gtctccgtcgactcggtgcgacacctgcacaacgcgcgccgtcgcccaccgtcgcagcga
gagatctttggtatagatgagatgaatatgcacgcgcacacgaattacctgagctgtggt
gccaccggccgtgctgtgttcgtgttccatgcggtcacagaacagcgcggtctgatcgct
gtcgtttctccacagaccaacactgcccttgttgtctttatccagccagcggaagccaca
aaacccgtgatcaactggggcatcatttgcgaggagagcgccaagcggctgcacacgacc
acgcccgagccgattcaagtcacttccgaggtggcggtggaccagcgggcggcgtggcgg
caggtctaccagcacctgagcgctgcgctggagagtacaaaggcacctcttctagcagtg
ctgcagagttgtctgcccacgtcgaccctcctacagcagcgctcgttgcctgtgggactg
ccatacctgcgcatcctaggcgctgcagaggatgagcgactgctgagcgacccgttccgc
tggacgcgtctgctggcgcggcggctgttcgagcgcttcttcgcgtcgttattgtgggta
gaggagcggctggcgctgagccgtatctccggcatcccgctctgcaacattgctcaagac
agctgtgtgcatgtactggatgtgctatacattcgtgccctgcaccggcgcagtcatgtg
ctgtggtgcagcagcgaccctctcatcaccttcgacaccgttgaggagcgtccgcgcgag
gtgtgcatggccggcggctacgcttcatggtgcgtagaattcggcctctctcgcctggac
gtcgttgcgcttcttttctcacaaacgattgaggagggagatgaccagaacgcgcgggtc
ttgtctgaccgtggtgtatccacgcacttcaatatcctgcgtgatctggtagccgacgtg
ctagggcaggctgtggacaacatcctcgccgacacactcctgaacaacgtggcgcggtgg
ctgcgcaacccgctgtcctcctgctacgagccgcgcttggtggagcttctcagtagcctt
gcacaccgtgccctcacgggcatcctgctccgcctcgccaaactcggcggccgtaccgta
aaggtggacggcagctctgtcaccgttctcacctcaaagtactcactacaggaggcagtg
agcttcgcaagctttttgacggcatcgctgcaggaccagccgatgctactgctgctctcc
ctgcagccccttcgatactggtgtccatacattgtgctcgatcctcgtgactacgccggc
ctgttcattttcgccgaggacgcgatcaagttcatgaagggcgaggagccgacgcgagcc
gatctgcacgtagcgcatcagctcacgatggctagccgactgcccaaccgcgtccgaaac
accttggtggcgcgggttgtcggcactctctaccagctgaacgagacagtacaccgtgtc
tactgccacactgtggctgatcacactgttacgctggctacgcgacataaccaactgacg
cggcgcgtgctggaggactcgcagagactttttgaggatgtcatgcaggcggatatcatg
gatgaggtgcagcgcatgacggacgcacgtgacctgtacaccgaggaggagcacacggct
cacgagcgtggcgagctgacgctctggtccagcggcgccgtcggactcgagtacgcgaag
tgtgtgtgccgtgtgctggagctcatcccatgcaacggcgctgtcggcaaggtgcgcaac
aacgccatgcgcctctgcggcatcagccccttctctgcccagtcacagttccaagccgac
ccgcttctggcgcatcgccttcagcccgtcacgtgcagcttctgcaactcgcacatctcc
atcgatttgctcgtgagacggaagtcagcggcatcgccttttacgtgcccggcgtgtgcg
gccccgattgccgccgttgctatggagggaacactagttcgtcgtgttagccagctgcta
cgagtctacactcagcaggattttgtgtgcacaaagtgtcgcgagatgatcacaacgtac
gtgggtgaaaggtgctgcggtgcgctagtcggcaaggccgcgccggtagagggcgaactc
cgggcactgcagtaccttgcgaagatccaaagttttccatggcttgccgagagcgtagag
acggcgcttttatgcacttga

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