KEGG   Leishmania panamensis: LPMP_353090
Entry
LPMP_353090       CDS       T06539                                 
Name
(RefSeq) exosome complex exonuclease RRP41, putative
  KO
K11600  exosome complex component RRP41
Organism
lpan  Leishmania panamensis
Pathway
lpan03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPMP_353090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpan03019]
    LPMP_353090
Messenger RNA biogenesis [BR:lpan03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LPMP_353090
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     LPMP_353090
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF1623
Other DBs
NCBI-GeneID: 22579338
NCBI-ProteinID: XP_010703246
UniProt: A0A088S2J5
LinkDB
Position
35:complement(1180582..1181322)
AA seq 246 aa
MSRQKEYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRESL
HKQEAKHDKVLVTCEVAVAAFAGESRRNPQRRSKLSEDIDAAVVQVARSVILLSQYPNSQ
IHIYIEVLQQDGNEKVACINAACLALVDANVAMRDVVCCISVGLLDEHMLIDLANDELRS
QCPVIVAAFTGHDTRNIIWLETTSRLPPDSVARLLKCAEQGAQELFETTIRKSLEEHAKK
ILTLQI
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtctcgccaaaaggagtacgtcagtccagcaggtcttcgcctggacggccgtcgtcca
ctggaggcacggcgcatggacatcgtattcggcacgctttccgcctgtgacggcagttgc
gacatcacagttgggcaatcgaaggtgtgtgcatccatctttgggccgcgagaatcactt
cacaagcaagaggcaaagcacgataaggtgcttgtcacgtgcgaggtggctgttgccgct
ttcgctggagaaagccgtcgcaatccgcagcggcgtagcaagctctcggaggacatcgac
gctgccgtcgttcaagtggcccgctccgtcatcctcctctcccagtaccccaactcgcag
attcacatttacatcgaggtccttcaacaggatgggaacgagaaggtcgcgtgcatcaat
gcagcatgcctcgccctggtcgacgcaaacgttgccatgcgggacgtggtgtgttgcatc
agtgtagggcttctggacgagcacatgctgatagacctggcaaacgacgagctgcgctct
cagtgcccagtgattgtggcagcgttcacgggacacgacacgcggaacatcatctggctg
gagacaacttcgcggctacctcccgactcggtggcgcggctgctcaagtgcgcggagcag
ggcgcccaggagctctttgagacaacgatccgaaagtcgctggaggaacacgcaaagaag
atcttgacactacaaatctag

DBGET integrated database retrieval system