KEGG   Leishmania panamensis: LPMP_354330
Entry
LPMP_354330       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
lpan  Leishmania panamensis
Pathway
lpan03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LPMP_354330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lpan03009]
    LPMP_354330
Ribosome biogenesis [BR:lpan03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    LPMP_354330
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st Utp21 WD40 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz EIF3I Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_LRRK2 NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 Beta-prop_RIG_1st PQQ_2 Beta-prop_NOL10_N Utp12 TAF1C_beta-prop PALB2_WD40
Other DBs
NCBI-GeneID: 22579461
NCBI-ProteinID: XP_010703366
UniProt: A0A088S2X7
LinkDB
Position
35:1549305..1552268
AA seq 987 aa
MQSFDPFRVVGSICGSVPVSPTLLYGTPVLMVATGRTFQLYKGKELAMMRGGPTFQDAVQ
AVAQAGKYRAVGEGPRLHVYVHHKPLWSSHHESATKPNITLLLAQDDLLFSVGEDKRIVV
WELKTGTVLQEMLVEKSETVTCLALLTAYTNKLLLATAEGTLQLWNFRSGVCLWYSVRSC
SGSGSSTVQTSRATAGSVAAITALACSRYKDIIVYGTTEGKAVVCNVAADEVITTFDHGD
SGAVTSLLFRTDKDGLLVTGTSRGEVVVWNLENRCMDGTLTRSKQVRSELEALERPHVDV
VHSLVMFDLPEYTSLLVTGGADNALMQFRFDTVDGLGVLVRERRGHMGSCTDAIFYNTDL
LVTAGNDRALRVTHVFSDRASWELSQGKLGKRGRELNMGREAVKLPPAIALAASTTRNYQ
WSSLVSLHTASALACGWRMDSRAMEFKLSGIQTSAHTARALALSDCGNYAVVGYSSGNVA
VLSLQNRSVRHLFDAGLGADRAHDSSVECVEVACGNTVVVTAGLDGVIKMWDLWSGKLKA
TIPTGQPMTKSCLHESSSLFIVAQHFTIRVYHANPDAGLTEGELRVPVRELDGHNSPVTA
LALAPDTYRYVVSTSGDGALLIWDLAAAACVGQYRFVSPALSLSFHPDALFLVTTHAGER
GAYLWVNNIRYGYVPEVVLAPKSNAVETLPWLHFPTAHGAAEGTSEGSANGGVQRTSATA
ALTEAEEEERAVAEAEEREAATTEACLFDASQDIALVRRRQIEAQQVALDAIATEGMQLA
DVPQRLWFNLTVLDQIKEKNQPLLPPKKKDVPFFLPTTQELRPTFLVLVSDNRKGDAENE
KGRVMRADMEALTRVQEMLVNAKHDALMDYFLSLKTAQAIDLELKRAVDYVNGSSYTAAE
LARMQACVKGLLSFITTWLRRNQNVDLVQGILADVVRSHGALLTRFGDALVPALEELAEV
QNMMRYSLDHLVSYPACLAGTFSGTIF
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgcaatcctttgacccgtttcgggtggtgggctccatctgcggatctgtcccggtgtcc
cccacgctgctctacggtacgccggtgctgatggtggccactggccgcacctttcagctg
tacaagggaaaggaactggcgatgatgcgcggaggtccgacgtttcaggacgcggtgcag
gcggtggcacaggccggcaagtaccgcgctgtcggggaggggccgcgcctgcacgtctac
gtgcaccacaagcccctctggtcgagccatcatgaatctgccacaaaaccgaacatcaca
ctcctgttggcccaggatgacctcctcttcagcgttggcgaggacaagcgtatcgttgtg
tgggagcttaagacgggcacggtgctacaagagatgttggtggagaagagtgagacggtc
acgtgccttgcacttttgacagcgtacacgaacaagctgcttctcgcgacggcagaggga
acgctgcagctctggaacttccgctctggtgtctgcctgtggtactccgtgcgcagctgt
agcggcagtggtagtagcaccgtgcagacatcacgcgccaccgctgggagtgtcgctgcc
atcacggcgctcgcttgtagtaggtacaaggacatcatcgtctacggcacgacggagggg
aaggctgttgtgtgcaacgtggcagcggatgaggtaatcaccactttcgaccatggcgac
agcggcgccgttacttcgctgctatttcgcacggacaaggacggcctgctggtgaccgga
acgagtcgtggggaggtagtcgtctggaacctcgaaaatcgatgcatggatggcaccttg
acccggtctaagcaagtgcggtcggagctggaggcactggaacgtcctcacgtcgatgtc
gtgcactcgctcgtcatgttcgacttacctgagtacacatcactgctcgtcacaggtggc
gctgacaacgccctcatgcaattccgttttgacaccgtggacggtcttggtgttttggtg
cgggagcgccgcgggcacatggggagctgcacagacgccatattttacaacacagacctt
cttgtcacggccggaaacgaccgagccctgcgtgtcacgcacgtcttttccgatcgtgcc
tcatgggagttgtcgcagggcaagttgggcaagcgcgggcgcgagctgaacatggggcgg
gaagccgtgaagctgcctcctgccatcgcgcttgccgcctcgaccacgcgcaactaccag
tggtcgagtcttgtgtcgctacacaccgcatctgcgctggcatgcggctggcgcatggat
agccgcgcgatggagtttaagctatccggcatccaaacttccgcccacaccgcccgtgcg
ttggcgctgtcggactgcggcaactacgccgtcgtcgggtactccagtggaaacgtcgcc
gttttgagcctgcagaaccgcagtgtgcgccacctgttcgacgccggtcttggtgccgat
cgagctcatgacagctcggtagaatgcgtagaagtggcatgcggcaataccgtcgtcgtg
acggccgggttggacggtgtgatcaagatgtgggacctgtggagtggcaagttgaaggca
actattcctaccggccagccaatgaccaagtcgtgtctgcacgagtcgtcatcgctcttt
attgtagctcaacactttaccattcgcgtctatcatgccaaccctgacgctggcctcacc
gaaggggagttgcgtgtcccagtccgcgagctggacggccacaacagccctgttacggca
cttgcactggctcctgacacctaccgctacgtagtgtcgacttccggagatggtgcgcta
ctcatatgggacttggccgccgccgcctgtgtcgggcagtaccgcttcgtatcgcccgct
ttatccctcagttttcaccctgatgcgctcttcctcgtcactacccacgccggtgagcgc
ggcgcgtatctgtgggtcaacaacatccgctatgggtacgtgccggaggtggttctggct
ccgaagtcgaacgcggtggagacgctgccgtggctgcacttccccacagcgcacggggca
gctgaggggactagcgagggtagtgcaaacggtggcgtgcagcgcacgtctgcaaccgcg
gcactcacggaggcggaggaagaagagcgcgcggtcgctgaggcagaggagcgggaggca
gccaccaccgaggcatgcttgtttgatgcatcgcaggacattgccctggtgcgccgtcga
cagatagaggcacagcaggtggcgctcgatgcaatcgcgacagaagggatgcagctcgct
gacgtgccgcagcgcctttggtttaacctcactgttctggaccaaatcaaggagaagaac
caacctctgctcccgcccaagaaaaaagatgtgcccttctttttgcccaccacacaggag
cttcgacccacttttctggtcctggtgtctgataaccgcaagggcgatgccgagaacgag
aaggggcgggttatgcgtgctgacatggaggcgctgacgcgggtgcaggagatgctcgtg
aacgcaaaacatgatgccctcatggactactttttatctctcaaaacggctcaagcgatc
gacctggagctgaagcgcgcggtggactacgtgaacggcagcagctacactgctgctgag
ctggcgaggatgcaagcatgcgtgaaaggtttgttgtctttcataacgacgtggttgcga
cgcaaccaaaatgtcgacttggtgcaaggcatccttgcggatgtggttcgctcgcatgga
gcgttgctgactcgttttggggatgcgctcgtgccggcgctggaggagctggcggaggtg
cagaacatgatgcgctactctctagatcacctcgtgtcgtacccagcctgcctcgcgggg
accttctctggcactatcttttaa

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