Lacticaseibacillus paracasei subsp. paracasei: LBPC_0553
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Entry
LBPC_0553 CDS
T04768
Name
(GenBank) putative ABC transporter ATP-binding component
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LBPC_0553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpap02000
]
LBPC_0553
01504 Antimicrobial resistance genes [BR:
lpap01504
]
LBPC_0553
Transporters [BR:
lpap02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LBPC_0553
Antimicrobial resistance genes [BR:
lpap01504
]
Gene variants
Macrolide resistance genes
Transporters
LBPC_0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
Dynamin_N
AAA_22
AAA_16
NACHT
AAA_15
AAA_28
FtsK_SpoIIIE
nSTAND6
TsaE
MMR_HSR1
AAA_18
AAA_33
AAA_30
ORC-CDC6-like
ABC_tran_Xtn
nSTAND3
NB-ARC
MobB
ATP-synt_ab
RsgA_GTPase
RNA_helicase
Zeta_toxin
AAA
Roc
AAA_27
DUF87
AAA_7
Pox_A32
DO-GTPase2
SRPRB
DUF815
MeaB
YobI-ATPase
cobW
PRK
DUF5615
Motif
Other DBs
NCBI-ProteinID:
BAN70849
LinkDB
All DBs
Position
complement(591498..592979)
Genome browser
AA seq
493 aa
AA seq
DB search
MSTIQIKQLNFAYDGQAPLFTNTTFDLDTNWHLGLVGRNGRGKTTLLRILQQALPYSGTV
TVPLQLQYFPQTLDETQLTLTAAQAITDVAQWQLERELNLLQADPNILWRPFVDLSGGEQ
TNVRLALLFIQDNGFALIDEPTNDLDLRSRRQVAAYLQQKTGFIVVSHDRDFLDSITDHT
LAIQRQQITLYQGNFSTFMTEKERQDQTELAKNGQLKTEITRLKRTAHDKKVWAENKEKS
IYGNPHIKDSGHNAGRGFISARAARTMKKSKNLEHRMTKEIDEKESLLKNLEKVDPLTML
PVSTHHHQLVVAEKVQVGFDQPLFQPISFTLTRGDRIAIVGDNGSGKSTLIRALLQQFTG
MQSGHLTLAPVSLSLVRQQYTDNRGTLVDFAKQHQLSRETLLNNLRKLGMPRADFNTPIE
HLSMGQQKKVELARSLATPGALYIWDEPLNYLDTYNQDQLVAAIKHYQPTMLFVEHDEHF
IEQVATKIIRLQP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgattcaaattaaacagctcaattttgcttatgacggtcaagcaccgcttttt
acgaacacaacctttgaccttgataccaactggcatctcggattggtcggtcgcaacggt
cgaggcaaaaccactttgttgcgaattttacaacaagcactcccctacagtggcacggtg
actgttcccttgcagttgcaatatttccctcaaacgctggatgaaacccaactgacgctg
actgccgcacaagccatcaccgatgttgcgcaatggcaactcgaacgtgaactaaatctg
ctccaagctgatcctaacattctctggcgcccatttgtcgatttatctggtggtgagcaa
acaaatgtgcgtctcgccttactgttcattcaagacaatggtttcgcgctcattgacgag
ccaaccaatgacctcgacctgcgcagccgccgacaagtcgccgcctatctccaacaaaaa
accggctttattgtcgtcagccatgatcgtgattttttggacagcatcaccgaccacacg
ctagcaatccagcggcagcaaattaccctctatcaaggcaatttctccaccttcatgacc
gaaaaagagcggcaagatcaaactgaactggccaaaaatggtcaacttaaaactgaaatt
acccgacttaaacgaacggctcatgataaaaaagtttgggcggaaaataaagaaaagagt
atctatggtaatccgcacatcaaggacagcggtcataatgctggtcgcgggtttattagc
gctcgagctgcacggacgatgaaaaaaagtaaaaatctcgaacaccggatgactaaagaa
atcgatgagaaggaaagtcttctgaagaacctagaaaaggttgatccactcaccatgctg
ccggtatcgacccatcaccatcaacttgtggtcgctgaaaaggtccaagtcggattcgat
caaccccttttccagccgatctcttttactttgacccgcggcgatcggattgccattgtt
ggtgacaatggcagcggcaagtcgaccttgatccgcgccttgctgcagcagttcaccggc
atgcagtcagggcacctcaccttggcccccgtcagtcttagtcttgttcgccaacaatac
accgataaccgcggtacattagtcgactttgccaaacagcaccagcttagccgtgaaacc
ttgcttaacaacttgcgcaaactcggcatgccgcgagccgactttaacacgccgattgag
catctgagcatgggccaacagaaaaaagtcgaactagcgcgatcactagccaccccggga
gctttgtacatttgggacgagccgctcaattatttggacacttacaaccaagaccagctg
gtcgccgccatcaagcattatcaaccgacgatgctttttgtcgagcacgatgagcatttt
atcgagcaagttgcgacaaaaatcattcgcctgcaaccatga
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