Lacticaseibacillus paracasei subsp. paracasei: LBPC_0603
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Entry
LBPC_0603 CDS
T04768
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpap03400
]
LBPC_0603
DNA repair and recombination proteins [BR:
lpap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBPC_0603
Archaeal homologous recombinant proteins
LBPC_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
BAN70899
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All DBs
Position
645808..646929
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AA seq
373 aa
AA seq
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MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAEQHKVDAIVIAGDLYDRALPSEAAV
SVLDNMLIKLNRDHGYPLLVISGNHDSAVRLRTGRAWYAATKMFVNTQVAEAFAPIELDG
VQFFLLPYFEPFAVRDYFQDKTITNVAQAIRPIVVKMKTLFKPNMRHILVSHFFAAGSDH
SASETKVNVGGLDAVPLDDLAAFDYVALGHLHNHHALHGEPKIQYSGALLKYAVSEAHQE
KGVYIVDTETMDREFVPLKPKHDLIELKASYADLTAPAYYQQQDRDAYIGIDLTDTQVIP
NVMAQLRQIYPRIISLRRENGVNAVKPLQERQRDLDPMSLLQTFFKDMTQDDLSAAQIKW
AKAGLTTAKKEQA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagattcttacacacagccgattggcatattggcaaaaaactaaatgattttgatttg
cttgaggatcaacaagctgtgtttgagcagctggtggaaacggctgagcagcataaagtt
gatgccattgtcattgcgggggatctctatgaccgcgccttgccaagcgaagctgctgtt
tccgttctggataacatgttgattaagttgaatcgtgaccacggctatccgttgttggtc
atttcaggcaaccatgactcggcggtacgcctgcgcacaggtcgagcatggtatgcagct
actaaaatgtttgttaatacccaagtagccgaagcttttgcacccattgagttggatggc
gtccaattctttttgctgccgtattttgaaccctttgctgttcgtgactattttcaagat
aagacaatcacgaatgtggctcaggcaattcgcccgattgtcgtgaaaatgaagacttta
tttaagccaaatatgcgtcatattctggttagtcattttttcgctgctggaagtgaccat
agtgcttcggaaacgaaagttaatgttggtggattggacgcggtaccgctggatgatttg
gcagcatttgattatgtggcactagggcatctgcacaaccatcatgctttgcatggtgaa
ccaaagattcaatatagcggtgctttgttaaaatacgcggtcagcgaggcccatcaagaa
aaaggggtctatattgtcgatactgagaccatggatcgtgagtttgtgccgttgaagcct
aagcacgatttaatcgagttaaaagctagttatgccgacttgacggctccagcatactat
cagcagcaggatcgagacgcctatattgggattgatttgaccgatacgcaagtaattccg
aatgtcatggcgcaattacgccagatttatccgcggattattagcctgcgccgtgagaac
ggcgtgaatgccgtcaagcctttgcaagagcggcagcgtgatttggatccgatgagtttg
ctgcagactttttttaaagatatgacacaagatgatttgtcggccgcccagattaagtgg
gcgaaggcagggttgacgacggctaaaaaggagcaggcataa
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