Lacticaseibacillus paracasei subsp. paracasei: LBPC_0707
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Entry
LBPC_0707 CDS
T04768
Name
(GenBank) ATP-dependent DNA and RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpap03019
]
LBPC_0707
03009 Ribosome biogenesis [BR:
lpap03009
]
LBPC_0707
Enzymes [BR:
lpap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBPC_0707
Messenger RNA biogenesis [BR:
lpap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBPC_0707
Ribosome biogenesis [BR:
lpap03009
]
Prokaryotic type
rRNA helicases
LBPC_0707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAN71003
LinkDB
All DBs
Position
752314..753660
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AA seq
448 aa
AA seq
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MENQFKQFQLKPFVIDGLNAMAITAPTPIQQKVIPALLRGENIVGQSQTGSGKTHAFLVP
LLSMVDPTEDATQVVITAPSRELANQIYAVAQQLIQTEPAIRINRLVGGMDKQKQIDKLQ
NHQPHVAIGTPGRILDMIKGYDLVPSSVRHFVVDEADMTLDMGFLETVDAIASSFPDHLQ
MAVFSATIPQKLEPFLRKYMDNPTTIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM
GHPFLVLIFANTKTSVDAIHDFLKHQGLKVAKIHGGIQPRERRRVMKDVADLKYQYVVAT
DLAARGIDIKGVSMVINAEIPRDNEFFIHRVGRTGRNGMAGTAVTLYEPGQEDQIAELEH
MGIKFAPKMIKNGELVDTYDRNRRVHRKPKQEDTSLAIRGLVKKAKQKHMPNYRKKIRTA
VLLERKRNTKIARRQALLAEKRKNRKRG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaattcaaacaatttcaactaaaaccttttgttatcgatggtctcaatgca
atggccatcaccgccccgacacccattcaacaaaaagttattccggcgcttttgcgtggt
gaaaacattgttggacaaagccagaccggtagcgggaaaactcacgcctttttggtaccc
ttactcagtatggtagatcctaccgaagatgcgactcaggtcgtgatcactgccccttca
cgtgagttagccaatcaaatttatgcggttgcccagcaactcatacaaactgagcccgcg
attcggattaaccgtttagtcgggggaatggacaagcaaaagcagatcgacaagttgcaa
aatcatcaaccacatgtggctatcggaacgccaggtcgaatcttggacatgatcaaaggc
tatgatttagtgccatcgtctgtccgtcattttgtagtcgacgaagctgacatgacgctg
gatatgggcttcctcgaaacggttgatgcgattgcctcgagttttccagatcatctgcaa
atggctgttttttcggcgactattccgcaaaaactggaaccattcttgcgcaagtacatg
gacaatccaacgacgattgaattgaaaccgcagtcggtgattgctgacacggttgaaaac
attttgattgcggcaaaagggcgcgataaaaatgagttaatctatcagcttgtcacgatg
gggcatccctttttagtgctgatttttgctaacaccaaaaccagcgtggatgctatccat
gacttcttgaagcatcaaggtttgaaggtggctaagattcatggtggcattcagccgcga
gaacgtcggcgcgtgatgaaggatgttgccgacctcaaatatcagtatgtggtcgccact
gatcttgctgctcggggtatcgatatcaagggggtctcaatggtcatcaatgccgagatt
ccgcgcgacaacgagttctttattcaccgagtgggccgaaccggtcggaatggcatggct
ggtacagcggtgacactgtacgaaccgggacaggaagatcaaattgccgaattagagcat
atgggcattaagtttgcgccgaaaatgatcaaaaacggtgagcttgtcgacacttatgac
cgcaatcgtcgagttcaccgcaaaccgaagcaagaagacaccagtcttgccattcgcggt
ttggtgaaaaaggcaaagcaaaagcacatgccgaattatcgtaaaaagattcgaactgcg
gtgttattagaacgcaaacgaaataccaaaattgctcggcgccaagcgctgttagcagaa
aaacgcaagaaccgcaaacgagggtga
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