Lacticaseibacillus paracasei subsp. paracasei: LBPC_0939
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Entry
LBPC_0939 CDS
T04768
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap03030
DNA replication
lpap03430
Mismatch repair
lpap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBPC_0939
03430 Mismatch repair
LBPC_0939
03440 Homologous recombination
LBPC_0939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpap03032
]
LBPC_0939
03400 DNA repair and recombination proteins [BR:
lpap03400
]
LBPC_0939
Enzymes [BR:
lpap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBPC_0939
DNA replication proteins [BR:
lpap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBPC_0939
DNA repair and recombination proteins [BR:
lpap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBPC_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAN71235
LinkDB
All DBs
Position
complement(998360..998902)
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNKVVDSFYTLINPQMQFDAQNIHIHGITPEMV
QDQPTFDQVWPHIQMFYTPGRIVTAHNAPFDVSVMRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALHIPLEHHHNALADSYACARILIAENEHFGEARIKSMMKLSKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcgccatggatttcgaaaccgccaatcgcaagcgagcctcagcgtgttca
ttggcgctcgtggtcgtccagcaaaataaggtggttgacagtttttacacccttattaat
ccgcagatgcagtttgatgcccaaaacattcacattcatggcatcacccctgaaatggtt
caagatcagccaacatttgatcaagtttggccgcatattcaaatgttctatacgccaggt
cggatcgtgaccgctcacaatgcaccgtttgatgtttcggttatgcgactgacactggat
cgttacggcattgcggcgccgcgctatcaagtgattgacacggttaaaacctcgcgacaa
tttttgccgaagttgccgaatcatcggttagatactgtcagtgccgccttacacattccg
cttgagcatcaccacaatgccttagcggatagttatgcctgtgcacggattttgatcgcc
gaaaatgagcactttggcgaagcgcggattaaaagcatgatgaaactttcaaaagcgggt
tga
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