KEGG   Lacticaseibacillus paracasei subsp. paracasei: LBPC_0960
Entry
LBPC_0960         CDS       T04768                                 
Name
(GenBank) type II secretion system protein
  KO
K02243  competence protein ComGA
Organism
lpap  Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:lpap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lpap02044]
    LBPC_0960
Secretion system [BR:lpap02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LBPC_0960
SSDB
Motif
Pfam: T2SSE nSTAND_NTPase5 nSTAND3 AAA_25 AAA_16 AAA_14 AAA_22 AAA AAA_7 NACHT ABC_tran AAA_29 TsaE ResIII AAA_5 SRPRB cobW NB-ARC AAA_33 NTPase_1 AAA_18 AAA_30 Rad17 ATPase_2 MobB YqeC RNA_helicase AAA_SelU SRP54 AAA_2 AAA_28 AAA_11 PhoH Zeta_toxin RsgA_GTPase AAA_23 AAA_8 AAA_24 CbiA
Other DBs
NCBI-ProteinID: BAN71256
LinkDB
Position
1023405..1024271
AA seq 288 aa
MQSVNKLLTIALEKGASDIYYLPSPQGYLIRLRVPTGLVTIAERDSKRGQQEINYLKFMA
GMNVAEHRRVQLGAFYQRESAAFLRLSSVADFRGGESLVVRIIKGIPDAAGARHLLDRLL
GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAESRMVLSIEDPVEINQPQFLQLQVNPEA
DMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHARSAADTPLRLS
SFGLPDELVAAALTASAAISLQYRPMIHPVAEVVVFKQVGQADQEVVS
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcaatcggtgaataagcttttgacaattgcgctggaaaagggtgctagcgatatttac
tatttgcctagtccgcaaggttatttgattcgcctacgggtaccgacgggcttggtaaca
atcgccgagcgagacagcaaacgtgggcagcaagaaattaattacttgaaatttatggcg
ggcatgaatgttgccgaacatcgccgcgttcaattgggagccttttatcaaagggaatca
gcagcttttttacggttaagttcagtggctgactttcgcggtggtgaatcactggtagtt
cgcataatcaaaggcattccagatgctgcaggcgcacgtcatctgttagatcgtctgttg
ggtattttactgcagaaacgcggcatgctgaccctagctgggccgactgggtcaggaaaa
acgacattactctatcagttagcgacgcgtttggcggaatcacgaatggtcttgtcgatc
gaggatccagttgagatcaatcagccgcaattcttacagttgcaagtcaatccggaggca
gacatgacctatccgcaattactgaaggcggcgctgcgccatcgaccagacgtcttgctg
attggagaaattcgtgatcgacaaacagcgcaaagtgcttgcgaagcggcgattagcggt
cacattgtcctagcgaccgtgcatgcccgatcagcggcggatacacccttaaggttgagc
agttttggcttgccggatgagttagtagcggcggcattgacggcgagtgcggcgatcagt
ttgcagtatcggccaatgattcacccagtggcggaagtcgtggttttcaagcaagtagga
caagctgatcaggaggtggtttcgtga

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