Lacticaseibacillus paracasei subsp. paracasei: LBPC_0997
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Entry
LBPC_0997 CDS
T04768
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpap03009
]
LBPC_0997
Enzymes [BR:
lpap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LBPC_0997
Ribosome biogenesis [BR:
lpap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LBPC_0997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
PrmA
Cons_hypoth95
MTS
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
REGB_T4
Motif
Other DBs
NCBI-ProteinID:
BAN71293
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Position
1059038..1060402
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AA seq
454 aa
AA seq
DB search
MAQPAVTKNQDLEVTIQDLTYEGMGVAKVDGFPLFIEDALPGEKMQVHVLKTQKQYGFAK
VVKRLSDSPDRVPGADSTYIRTGIAPLSILAYPAQLQFKQKQIQELYKKAHLDIAVLPTI
GMTNPLGYRNKAQVPVRTVNGELQTGFYKKHSHDLVPIEDFLIQDPKIDQAIVVVRDLLR
KYHVPAYDERANKGVIRNIMVRRGHYTKQMMIVLVSQTWQVPHLKDIVEEITLALPEVTS
VVVNLNDKRTNVILGRKSRTIYGEDYLLDKLLGSEFQISPVSFYQVNPVQTEVLYKKAIE
AAGLTGKENVIDAYSGIGTISLTMARHAKHVYGVEVVEPAVRDARANAVRNHIDNVTFEV
GKAEEVIQRWKDNELPVDVLMVDPPRKGLDKSFIDAVGYMKPPKIVYVSCNPATLARDLQ
LLAAFGYTAKETQPVDMFPQTQHIESITALTLAK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttggcccaaccagctgtaaccaagaaccaagatctggaagttaccattcaagatctcact
tatgaagggatgggcgttgccaaggttgacggctttccgcttttcattgaagatgccctg
cctggcgaaaaaatgcaggtgcatgtcctcaaaacgcagaagcaatatggctttgccaaa
gttgtcaaacgattgagcgactcaccggatcgtgttcccggtgcagatagcacttatatc
cgtacggggattgcgccactgtcgatcttggcatatccggcacaattgcaatttaagcag
aaacaaattcaagaactttataaaaaagcgcatcttgatattgcggtgctgccgaccatc
gggatgacgaatcctttaggctatcgcaacaaggcgcaagtaccggttcgtaccgtgaat
ggcgaactgcaaactggcttttataaaaaacacagccacgacctcgtaccaattgaagac
tttctgattcaagatccgaaaattgaccaagccattgtggtggtgcgtgatcttttacga
aaataccatgtgccagcttatgatgaacgcgctaataaaggcgttattcgtaacatcatg
gtgcgccggggccattatacgaagcagatgatgattgtcttggtgtcacaaacttggcaa
gtgccgcatctcaaagatattgtcgaagagatcaccttagcattaccagaagtaacgagt
gtggttgtgaacttgaatgacaaacgaaccaacgtcattctaggccgcaagtcacgaacc
atttacggcgaggactatttgctggataagttgctaggcagtgaattccagatctcgcca
gtcagtttttatcaggttaatccggttcagactgaggtgctttacaaaaaggccattgag
gctgctggtctgactggtaaggaaaatgtgatcgatgcttattcaggtatcgggacgatt
tccttgacgatggcacgtcatgccaaacatgtttacggcgtcgaagtggttgaacctgct
gtgcgcgatgcacgggcaaacgcggtgcgcaatcacatcgataatgtcacctttgaagtc
ggcaaggcggaggaggtcatccaacgctggaaagacaacgaactgccagtggatgtgctc
atggtcgatccgccgcgcaaaggactggataaaagtttcatcgacgctgtcggttatatg
aagccgccaaagatcgtctatgtgtcctgcaaccccgcgactttggcgcgggatttgcag
ctgctagccgcctttggctacacagcaaaggaaacccagccagtggacatgttcccgcag
acgcagcatattgagagtattacggcgttgacgttggcgaagtaa
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