Lacticaseibacillus paracasei subsp. paracasei: LBPC_1404
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Entry
LBPC_1404 CDS
T04768
Name
(GenBank) competence protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lpap
Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap00240
Pyrimidine metabolism
lpap01100
Metabolic pathways
lpap01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lpap00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LBPC_1404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lpap02044
]
LBPC_1404
Enzymes [BR:
lpap01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
LBPC_1404
Secretion system [BR:
lpap02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
LBPC_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
Bd3614-deam
APOBEC2
APOBEC_N
XOO_2897-deam
NAD1
APOBEC3
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
BAN71700
LinkDB
All DBs
Position
complement(1486848..1487309)
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AA seq
153 aa
AA seq
DB search
MTDSIVPSKRTVHRESWDQYFLELAEKVSERSTCERATVGAVLVQEHRIIATGYNGAISG
DPHCDEAGHLMRDGHCIRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAG
IKRVVYAQDYRNDPYGEALLKQHHLDVVRLSQQ
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagcattgtgccatccaaacgaaccgttcatcgggaaagttgggatcagtat
tttttggagttagcggagaaggtctcggaacgatcaacctgtgagcgagccacagttggg
gctgttctggtgcaagaacatcggatcattgcgactggctataatggtgccattagtggc
gatccgcactgtgatgaggctggccatttgatgcgagacggccattgcattcgcacaatt
catgccgaaatgaacgcgattatccagtgtgcggctaacggtgtcagtacccatggtgca
actgtttacgtaaatttttttccctgtcttaattgcaccaaagccttgattcaggccggt
atcaagcgcgtggtttatgcgcaagattatcgtaacgatccatacggcgaagccttgcta
aagcagcatcatttggatgttgtgcgcctcagccaacaataa
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